DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment siz and Iqsec1

DIOPT Version :10

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_038964676.1 Gene:Iqsec1 / 686590 RGDID:1596313 Length:1203 Species:Rattus norvegicus


Alignment Length:1346 Identity:424/1346 - (31%)
Similarity:587/1346 - (43%) Gaps:352/1346 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 AGGVAPPGPVSLPLPLSINMPHHHVHAMPYNVDELLRENNALHAKIKELSLERDRLLCEVSNLRL 111
            |....|||..:                      |.|:|...:.|..:||..:|.|.:.|     |
  Rat     2 ASAAEPPGTAA----------------------EYLQELTRIVAAQQELLAQRRRRIEE-----L 39

  Fly   112 ELDMSELKRLPVDLDDNFPQKSLERSGSTQYELAGAQQPGSANASTCTDSGSVGGYVYLQNHYAP 176
            |..::.|.|....|        |||........|....||.:         .:|....|.:....
  Rat    40 ERQVARLSRENAGL--------LERHRRHLAACARRPDPGPS---------PLGAIPELSSRRDK 87

  Fly   177 GAHSSSAAINYPAQQHPQMVYQIQQYPTCHQQQQQQHLQQQQHLHQTGAGHYMQVTATGGGQYHH 241
            ....||.:|....:....:            ...:..::.:....:||      .:......||.
  Rat    88 SEEESSRSIRSSLETGSSL------------STDRYSVEGEAPSSETG------TSLDSPSAYHQ 134

  Fly   242 HHMLHGHG----HHAHHHGGAV-VIAGSGVGTGLGSGATSVIMQHQQQQQQQQNMHKKNSIRNGG 301
            ..::.|..    |:.|...||. :.||.|               .||:.::.:..|..:.:|...
  Rat   135 GPLVPGSSLSPDHYEHTSVGAYGLYAGPG---------------PQQRTRRPRLQHSTSVLRKQA 184

  Fly   302 --DVLKRTRAQS-AYELSQDLLEKQIELLERKYGG-VRARNAAVTIQRAFRHYMMVKKFASITAM 362
              :.:||:|:.| :||||.||.:||:|:||||||| :..|:||.|||.|||.|.|.|.|..:.: 
  Rat   185 EEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRLVTRHAARTIQTAFRQYQMNKNFERLRS- 248

  Fly   363 AKAEKRLSRRMVVTASSLGLAEEGASS-SSAYGSATESQLTEQQQQQQAQQQQQPRVTIMAGPAG 426
            :.:|.|:|||:|::...:..:.||... .|:|....:..:|....|..|         ::....|
  Rat   249 SMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVTNDGSQLGA---------LVPSECG 304

  Fly   427 AAS-PGLSRTPPT-------------------------------RSLSMRE-------------- 445
            ..| |.|....|:                               |||...|              
  Rat   305 DLSDPALKSPAPSSDFADAITELEDAFSRQVKSLAESIDDALNCRSLHSEEVPASDTARARDTEP 369

  Fly   446 --------RRQLD------------------CSPIPRSQSGASPASISSSTVSTSALASHPHVNL 484
                    .|:||                  ..|:|.||:|..|:|..|.....|..|:..:..|
  Rat   370 KPGLHGMDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQAGDRPSSTESDLRLRSGGAAQDYWAL 434

  Fly   485 LHAAEPHYYNAQALPQGAAYYTSYHGSPHDLSYASSADTSLNASWVNTSGHSP----HTPYYSAA 545
            .|..:.           |...||...:|.    ....:..|...      |.|    ..|..|:.
  Rat   435 AHKEDK-----------ADTDTSCRSTPS----LERPEPRLRVE------HLPLLTIEPPSDSSV 478

  Fly   546 QIYMRPKGGS----TTPTPSCSGSTGSGSGGSGSGSSKKVPPEVPKRTSSITAQQQTQLLLLQRQ 606
            ::..|....|    :....|..|..||...|...|..|.:|.|.|:                  .
  Rat   479 ELSDRSDRSSLKRQSAYERSLGGQQGSPKHGPHGGPPKGLPREEPE------------------L 525

  Fly   607 TPPPPSLLRTNGLCKTAENGSLTSVQSSGSDSSVTSAERNLNSDLGSDRSNSPHTWKRGTALNSS 671
            .|.||..|.::    .|.|||......|.||          .||..:|..||  |......:|.|
  Rat   526 RPRPPRPLESH----LAINGSANRQSKSESD----------YSDGDNDSINS--TSNSNDTINCS 574

  Fly   672 QQFSTHSADSAGAVSGGGVGVAGGAGVYAAQMQAAVAAATAAGGMPPADDHAISSHTSAAQYEQH 736
            .:                                                  .||..|..:....
  Rat   575 SE--------------------------------------------------SSSRDSLREQTLS 589

  Fly   737 EQQQHEQQQLQAAAAAAGVAQNYKMSETIRKRQYRVGLNLFNKKPEKGITYLIRRGFLENTPQGV 801
            :|..|::.:....:.|..       ::.||||.||:|||||||||||||.|||.|||:.:||.||
  Rat   590 KQTYHKETRNSWDSPAFS-------NDVIRKRHYRIGLNLFNKKPEKGIQYLIERGFVPDTPVGV 647

  Fly   802 ARFLITRKGLSRQMIGEYLGNLQNQFNMAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQKI 866
            |.||:.|||||||||||:|||.|.|||..||.|...|:|.|..::|.|||||||:.|:.|||||:
  Rat   648 AHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSAMELDEALRKFQAHIRVQGEAQKV 712

  Fly   867 ERLMEIFSQRYCECNADIVGRLRSSDTIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRGI 931
            |||:|.||||||.||..:|.:.|:.||||:||||||:||||:::||:||||:|::|||:|||||:
  Rat   713 ERLIEAFSQRYCVCNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFVKNLRGV 777

  Fly   932 DDCHDIDKDMLMGIYDRVKSDEFKPGSDHVTQVMKVQATIVGKKP----------NLALPHRRLV 986
            ||..||.::.|:|||:|::..|.|...|||:||.||:..||||||          .|:|||||||
  Rat   778 DDGEDIPRETLIGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLV 842

  Fly   987 CYCRLYEIPDVNKKERPGVHQREVFLFNDLLVITKIFSKKKTSVTYTFRNSFPLCGTVVTLLDMP 1051
            |||||:|:||.||.::.|:||||:||||||||:||||.|||.||||:||.||.|.|..|.|.:..
  Rat   843 CYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQ 907

  Fly  1052 NYPFCIQLSQKVDG---KILITFNARNEHDRCKFAEDLKESISEMDEMESLRIEAELERQKSARN 1113
            .||..|:|:..|.|   |:||.|||.|..||.||.:||:||::|:.|||..|||:|||:||    
  Rat   908 YYPNGIRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESVAEVQEMEKHRIESELEKQK---- 968

  Fly  1114 RAPGNAENRDSGVADVEVCPCPYQQGSQASGEQAPNSADNS----QQLKRSALSNSLLDMHEQFG 1174
                       ||....:..|...:....:|..:....|:|    :.|||||||:||.|:.|.  
  Rat   969 -----------GVVRPSMSQCSSLKKESGNGTLSRACLDDSYASGEGLKRSALSSSLRDLSEA-- 1020

  Fly  1175 NEKPQRRGSVGSLDSGMSISFQST----TTSSASRE----------NAAAIAAAANAAAAAKMRF 1225
             .|..||.|.|||:|.:..|..|:    ..::::||          |::::..:...:...|...
  Rat  1021 -GKRGRRSSAGSLESNVEGSIISSPHMRRRATSTRECPSRPPQPVPNSSSLLGSLFGSRRGKPPP 1084

  Fly  1226 NM-PPTAAIATPSNVYAAPGMQ---------AYTHANFVQQSQAAY 1261
            .. ||:|....|.:.: .||..         .|.||   ||:...|
  Rat  1085 QAHPPSAPPPAPPHAH-HPGPSEGPLHGHHAQYCHA---QQNPPPY 1126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:460178 121/187 (65%)
PH_IQSEC 981..1108 CDD:270128 79/129 (61%)
Iqsec1XP_038964676.1 Sec7 612..800 CDD:460178 121/187 (65%)
IQ_SEC7_PH 832..961 CDD:465120 76/128 (59%)

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