DRSC/TRiP Functional Genomics Resources

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Protein Alignment siz and fbxo8

DIOPT Version :10

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001035397.1 Gene:fbxo8 / 678549 ZFINID:ZDB-GENE-060421-7091 Length:323 Species:Danio rerio


Alignment Length:188 Identity:54/188 - (28%)
Similarity:92/188 - (48%) Gaps:37/188 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   777 FNKKPEKGITYLIRRGFLENTPQGVARFLITRKGLSRQMIGEYLG-------------NLQNQFN 828
            ||..|::||:|.:.||.|...|:.:|:|:...:.|:.:|:..||.             |..||| 
Zfish   150 FNANPQEGISYFMSRGILVEHPKEIAKFIFYTRMLNWKMLRIYLDERRDVLDELVTLHNFSNQF- 213

  Fly   829 MAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGE-AQKIERLMEIFSQRYCECNADIVGRL-RSS 891
                             :..|||.|..:...|.| .:.:|.|:..||.|:|.||..:|..: .|.
Zfish   214 -----------------LPNALRDFFRHIHAPEERGEYLETLITKFSHRFCACNPALVQEVGLSP 261

  Fly   892 DTIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRGIDDCHDIDKDMLMGIYDRV 949
            |.::||.:::|:|:.||.:|::|  .:|...:||:|.|..  ..:|.:|.:..:||.:
Zfish   262 DAVYVLCYSLILLSIDLTSPHVK--NKMSKREFIRNTRRA--AQNISEDFVGHLYDNI 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:460178 54/188 (29%)
PH_IQSEC 981..1108 CDD:270128
fbxo8NP_001035397.1 F-box_FBXO8 72..117 CDD:438860
Sec7 141..316 CDD:238100 54/188 (29%)
Blue background indicates that the domain is not in the aligned region.

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