DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment siz and cyth4a

DIOPT Version :9

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_695228.4 Gene:cyth4a / 566849 ZFINID:ZDB-GENE-090624-6 Length:411 Species:Danio rerio


Alignment Length:384 Identity:110/384 - (28%)
Similarity:181/384 - (47%) Gaps:76/384 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   737 EQQQHEQQQLQAAAAAAGVAQNYKMSETIRKRQYRVGLNLFNKKPEKGITYLIRRGFLENTPQGV 801
            |....|.|.::|......|.:|         ::.:.|...||..|:|||.||:..|.|...|:.|
Zfish    54 ENMMTEIQTMEADDENKNVMKN---------KRIQCGKKKFNMDPKKGIQYLVDNGLLAWKPESV 109

  Fly   802 ARFLITRKGLSRQMIGEYLGNLQNQFNMAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQKI 866
            |.||...:||::..||.:||. :.:.::.:|..|....:.|...:..|||:|...||:|||||||
Zfish   110 AEFLYKEEGLNKTAIGNFLGE-REEIHLQILQAFVHLHEFSNLNLVQALRQFLWSFRLPGEAQKI 173

  Fly   867 ERLMEIFSQRYCECNADIVGRLRSSDTIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRGI 931
            :|:||.|:||||.||   .|..:|:||.::|:||||||||.||.||:|.  :..:|.||...|||
Zfish   174 DRMMEAFAQRYCTCN---TGVFQSTDTCYILSFAIIMLNTSLHNPNVKD--KTTLERFISMNRGI 233

  Fly   932 DDCHDIDKDMLMGIYDRVKSDEFK----PGSDHVTQVMKVQATIVGKKPNLALPHRRLVCYCRLY 992
            ::..|:..::|..:|:.:|::.||    .|:|                    |.|        .:
Zfish   234 NNGGDLPSELLEKLYESIKNEPFKIPEDDGND--------------------LTH--------TF 270

  Fly   993 EIPD-----VNKKERPGVHQREVFLFNDLLVITKIFSKKKTSVTYTFRNSFPLCGTVVTLLDMPN 1052
            ..||     :.:..|....:|..|:..|..:....::..|..     :...||....|..:|.|:
Zfish   271 FNPDREGWLLKEGGRIKTWKRRWFILTDGCLYYFQYTTDKEP-----KGIIPLENLCVKEVDDPH 330

  Fly  1053 YPFCIQ---LSQK----------VDGKILI------TFNARNEHDRCKFAEDLKESISE 1092
            ..||::   |.||          .||::::      ..:..:|.:|.::.:.::..|::
Zfish   331 KQFCLEVYSLHQKGETIKACKTETDGRVVMGKHHSYKLSTASEEERAEWIQAIRACITK 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:279680 76/187 (41%)
PH_IQSEC 981..1108 CDD:270128 23/136 (17%)
cyth4aXP_695228.4 Sec7 74..256 CDD:279680 77/196 (39%)
PH_GRP1-like 271..390 CDD:269954 22/124 (18%)
PH 275..387 CDD:278594 19/116 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582802
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.