DRSC/TRiP Functional Genomics Resources

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Protein Alignment siz and psd2

DIOPT Version :10

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_068069402.2 Gene:psd2 / 557199 ZFINID:ZDB-GENE-030131-3033 Length:835 Species:Danio rerio


Alignment Length:509 Identity:107/509 - (21%)
Similarity:199/509 - (39%) Gaps:121/509 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   776 LFNKKPEKGITYLIRRGFLENTPQG----------VARFLITRKGLSRQMIGEYLGNLQNQFNMA 830
            |.:...|.|....:.||..:....|          :|:.|...:|..|..:..:||. .|:|:..
Zfish   345 LCDSDSELGSVDTLERGSTDTLANGCRVDADAAKRLAKRLFYLEGFKRCDVARHLGK-NNEFSQL 408

  Fly   831 VLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQKIERLMEIFSQRYCECNADIVGRLRSSDTIF 895
            |.|.:....|.:|..:|.|||.|...|.:.||.|:.||::..||:|:|.||.:   .|.|.|...
Zfish   409 VASEYLSFFDFTGLSLDRALRNFLKAFPLMGETQERERVLVHFSKRFCHCNPE---TLTSEDGAH 470

  Fly   896 VLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRGIDDCHDIDKDMLMGIYDRVKSDEFKPGSDH 960
            .|..|:::||||||..|:  .::|..:.||.||.|:||..|..|::|..:|:.:|:::.:...:.
Zfish   471 TLTCALMLLNTDLHGHNI--GKKMSCQQFISNLDGLDDGKDFPKELLKVLYNSIKNEKLEWAIEE 533

  Fly   961 ------VTQVMKVQATIVGKK---------PNLALPHRRLVCYCRLYEIPDVNKKE--------- 1001
                  ::::::.|....||:         |.:.:|   |:.....|:...:.:|.         
Zfish   534 EELRKSLSELVEEQCEAGGKRVVRVTDGSNPFIGIP---LLLNATTYKHGVLTRKSHADMDGKRT 595

  Fly  1002 --------------------------RPGVHQREVFLFNDLLVITKI------FSKK------KT 1028
                                      :|.....||.|.|.:.|...:      :||:      ||
Zfish   596 PRGRRGWKKFYAVLKGMILYLQKDEYKPDKDLSEVDLKNAVRVHHALATRACDYSKRQNVLKLKT 660

  Fly  1029 S---------------VTYTFRNSFPLCGTVVTLLDMPNYPFCIQLSQKVDGKILITFNAR-NEH 1077
            |               :::.||     ...|..|...|.:|..|...:|....:|.:...| |:.
Zfish   661 SDWRVFLLQAPSEEEMMSWIFR-----INLVAALFSAPAFPAAIGSMKKFCRPLLPSSTTRLNQE 720

  Fly  1078 DRCKFAEDLKESISEMDEMESLRIEAELERQKSARNRAPGNAENRDSGVAD--VEVCPCPYQQGS 1140
            ::.|         |..::::.:.:|.| |.::|.....|.:.|:.:..:.:  :....|.|:...
Zfish   721 EQLK---------SHENKLKQVSVELE-EHKRSPPELTPKSKESEEYRIKEHYLTYEKCRYETYI 775

  Fly  1141 QASGEQAPNSADNSQQLKRSALSNSLLDMHEQFGNEKPQRRGSVGSLDSGMSIS 1194
            .....:....:|:..:::.|..|....:.|.:.....|       |:..|..::
Zfish   776 SLLQAKIRAGSDDLDKIEASLFSGEAKEGHLRKTQSSP-------SISQGQGVN 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:460178 60/187 (32%)
PH_IQSEC 981..1108 CDD:270128 31/189 (16%)
psd2XP_068069402.2 None

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