DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment siz and Iqsec3

DIOPT Version :9

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_997500.1 Gene:Iqsec3 / 404781 RGDID:1593191 Length:1194 Species:Rattus norvegicus


Alignment Length:1265 Identity:384/1265 - (30%)
Similarity:539/1265 - (42%) Gaps:297/1265 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 VHAMPYNVDELLRENNALHAKIKELSLERDRLLCEVSNLRLELDMSELKRLPVDLDDNFPQKSLE 135
            :|.....:|||.|       ::.|||.| :|.|.|...|        |:..|.......|...|.
  Rat    29 IHTQRQRIDELER-------RLDELSAE-NRSLWEHQQL--------LQAQPPPGLVPPPSAPLP 77

  Fly   136 RSGSTQYELAGAQQPGSANASTCTDSGSVGGYVYLQNHYAPGAHSSSAAINYPAQQHPQMVYQIQ 200
            ...:|......||:|                   ||:|    .....|....|.|.|.|::.|.|
  Rat    78 APAATAPAATAAQEP-------------------LQDH----GQLIPATPEPPLQHHGQLLAQPQ 119

  Fly   201 QYPTCHQQQQQQHLQQQQHLHQTGAGHYMQ---------VTATGGGQYHHHHMLHGHG------- 249
            ..|:...|     ..|..|.|....|....         ..|.|....|......|.|       
  Rat   120 PAPSSRVQ-----TPQSPHQHPVAPGAVADKEKERPSSCCAAAGALLQHASPAALGKGVLSRRPK 179

  Fly   250 -----HH-----------------AHHHGGAVVIAGSG----VGTGLGSGATSVIMQHQQQQQQQ 288
                 |.                 |....|:...||.|    |...:.:|..|......|..:.|
  Rat   180 NETVLHQFCCPATDTEQKPACSDLASQSDGSCAQAGGGMEDSVVAAVAAGRPSAHAPKAQAPELQ 244

  Fly   289 QNMHKKNSI---RNG-------GD--------VLKRTRAQSAYELSQDLLEKQIELLERKYGG-V 334
            |...:..::   |.|       |.        :...|.|.|.||||.||..||||:||.|||| :
  Rat   245 QEEERPGAVGSPRAGPLRAASPGQQQPALATALCSHTPAASEYELSLDLKNKQIEMLEHKYGGHL 309

  Fly   335 RARNAAVTIQRAFRHYMMVKKFASITAMAKAEKRLSRRMVV------TASSLGLAEEGASSSSAY 393
            .:|.||.|||.|||.|.:.|.|..| ..:..|.||.||:.:      ||.|| :||:....|.. 
  Rat   310 VSRRAACTIQTAFRQYQLSKNFEKI-RNSLLESRLPRRISLRKVRAPTAESL-VAEKALLESCG- 371

  Fly   394 GSATESQLTEQQQQQQAQQQQQPRVTIMAGPAGAASPGLSRTPPTRSLSMRERRQLDCSPIPRSQ 458
                                      ::..|.| .||.|   |||.:.|:.|   |:.|...:.|
  Rat   372 --------------------------LLGLPLG-RSPSL---PPTFAGSLTE---LEDSFTEQVQ 403

  Fly   459 SGASPASISSSTVSTSALASHPHVNLLHAAEPHYYNAQALPQGAAYYTSYHGSPHDLSYASSADT 523
            |.|.....:.||.|...:.|                   |.:..||..      |...:.|:...
  Rat   404 SLAKSIDDALSTWSLKTMCS-------------------LQESGAYQL------HQALHPSAGQP 443

  Fly   524 SLNASWVNTSGHSPHTPYYSAAQIYMRPKGGSTT--------------PTPSCSGSTG---SGSG 571
            .|...    :...|.:...|..:....|:|.|.|              ...|.|.||.   :...
  Rat   444 GLETE----AAREPDSGPGSGDEAGSLPQGHSGTLMMAFRDVTVQIANQNISVSSSTALSVANCL 504

  Fly   572 GSGSGSSKKVPPEVPKRTSSITAQQQTQLLLLQRQTPPPPSLLRTNGLCKTAENGSLTSVQSSGS 636
            |:.:..:...|..|.........|:.:::...:...||...       .:.||:|:.::.:.:.:
  Rat   505 GAQTAQATAEPAAVQTEQGDAATQEVSEVPASELMDPPVED-------SEAAESGAQSAHEPTVA 562

  Fly   637 DSSV-----TSAERNLNSDLGSDRSNSPHTWKRGTALNSSQQFSTHSADSAGAVSGGGVGVAGGA 696
            ::.|     |.||   ..:.|:.::......:.|   ::|:|.|:.||.:..|.||..|..|.. 
  Rat   563 EAVVEEAVATEAE---EEEEGAGQAGKGAEAEVG---DNSEQLSSSSASTKSAKSGSEVSAAAS- 620

  Fly   697 GVYAAQMQAAVAAATAAGGMPPADDHAISSHTSAAQYEQHEQQQHEQQQLQAAAAAAGVAQNYKM 761
               ...:||.:.:........||...:.:..|                                 
  Rat   621 ---KEALQAVILSLPRYHCENPASCRSPTLST--------------------------------- 649

  Fly   762 SETIRKRQYRVGLNLFNKKPEKGITYLIRRGFLENTPQGVARFLITRKGLSRQMIGEYLGNLQNQ 826
             :|:|||.||:||||||..|:|||.:||.|||:.:||.|||.||:.|||||||||||:|||.:.|
  Rat   650 -DTLRKRLYRIGLNLFNINPDKGIQFLISRGFIPDTPIGVAHFLLQRKGLSRQMIGEFLGNSKKQ 713

  Fly   827 FNMAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQKIERLMEIFSQRYCECNADIVGRLRSS 891
            ||..||.|...|:|.|..::|.|||||||:.|:.|||||:|||:|.||||||.||.::|.:..:.
  Rat   714 FNRDVLDCVVDEMDFSNMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCMCNPEVVQQFHNP 778

  Fly   892 DTIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRGIDDCHDIDKDMLMGIYDRVKSDEFKP 956
            ||||:||||||:||||:::||:||:|:|.:||||:||||:||..||.:::::|||:|::..|.|.
  Rat   779 DTIFILAFAIILLNTDMYSPNIKPDRKMMLEDFIRNLRGVDDGADIPRELVVGIYERIQQKELKS 843

  Fly   957 GSDHVTQVMKVQATIVGKKPNLALPHRRLVCYCRLYEIPDVNKKERPGVHQREVFLFNDLLVITK 1021
            ..||||.|.||:.:|||.|..|::|||||||..||:|:.||||.::...||||||||||||||.|
  Rat   844 NEDHVTYVTKVEKSIVGMKTVLSMPHRRLVCCSRLFEVTDVNKLQKQAAHQREVFLFNDLLVILK 908

  Fly  1022 IFSKKKTSVTYTFRNSFPLCGTVVTLLDMPNYPFCIQLSQKVDG---KILITFNARNEHDRCKFA 1083
            :..|||:|.||||..:..|.|....|.:...|...|.|:..:.|   |.::.|.|....:..||.
  Rat   909 LCPKKKSSFTYTFCKAVGLLGMRFHLFENEYYSHGITLATPLSGSEKKQVLHFCALGSDEMQKFV 973

  Fly  1084 EDLKESISEMDEMESLRIEAELERQKSARNRAPGNAENRDSGVADVEVCPCPYQQGSQASGEQAP 1148
            |||||||:|:.|:|.:|||.|||||:..:..:..:|                   |:|..    |
  Rat   974 EDLKESIAEVTELEQIRIEWELERQQGTKTLSARSA-------------------GAQGD----P 1015

  Fly  1149 NSADNSQQLKRSALSNSLLDMHEQFGNEKPQRRGSVGSLDSGMSISFQSTTTSSASRENAAAIAA 1213
            .|...|...||.|::          |.:..:..|.| |:.:.:. :||.:......|        
  Rat  1016 QSKQGSPTAKREAMA----------GEKATESSGEV-SIHNRLQ-TFQHSPKLGVER-------- 1060

  Fly  1214 AANAAAAAKMRFNMPPTAAIATPSNVYAAP 1243
              .|.|.:......||......||.:...|
  Rat  1061 --GAPAPSPPTSPPPPLPPDPQPSPLREQP 1088

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:279680 113/187 (60%)
PH_IQSEC 981..1108 CDD:270128 65/129 (50%)
Iqsec3NP_997500.1 bZIP <32..63 CDD:269834 13/46 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..149 23/114 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 229..272 8/42 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 439..471 6/35 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 515..610 19/107 (18%)
Sec7 653..841 CDD:279680 113/187 (60%)
PH_IQSEC 868..998 CDD:270128 65/129 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1002..1099 23/132 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1137..1175
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342744
Domainoid 1 1.000 262 1.000 Domainoid score I1874
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 538 1.000 Inparanoid score I1148
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D360558at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm45559
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10663
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X920
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.090

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