DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment siz and sec74

DIOPT Version :9

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_594894.2 Gene:sec74 / 2542073 PomBaseID:SPAC26F1.01 Length:928 Species:Schizosaccharomyces pombe


Alignment Length:968 Identity:189/968 - (19%)
Similarity:330/968 - (34%) Gaps:316/968 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 PIPRSQSGASPASISSSTVSTSALASHPHVNLLHAAEPHYYNAQALPQGAAYYTSYHGSPHDLSY 517
            |:|..:.|.|        ...|||...   |....::|........|:    .:|.| ||...:|
pombe    28 PLPSRRKGKS--------ALRSALEKK---NRKSKSKPKVTITSDTPK----VSSQH-SPVSSAY 76

  Fly   518 ASSADTSLNASWVNTSGHSPH---TPYYSAAQIYMRPK--GGSTTPTPSCSGS--TGSGSGGSGS 575
            ...:.|.|::.    ||||..   :...|:|.....||  ..|.:.:..||..  ..|.|.|.|.
pombe    77 TGDSTTDLDSK----SGHSSSQKLSNKVSSALKLTIPKRWRSSKSSSSQCSSPFLPTSSSNGHGD 137

  Fly   576 GSSKKVPPEVPKRTSSITAQQQTQLLLLQRQTPPPPSLLRTNGLCKTAENGSLT-SVQSSGSDSS 639
            .:|..:|.:..:.:|..:........:......|..|.|........||..:.| |:..|||.:.
pombe   138 DASLNLPDKKSRPSSQSSIFLSNWSTIFSSNASPTDSQLSPTHTSTIAELAASTLSIFPSGSYAG 202

  Fly   640 VT---SAERNLNSDLGSDRSNSPHTWKRGTALNS-SQQFSTHSADSAGAVSGGGVGVAGGAGVYA 700
            .|   .:..:::|.....||.|         :|| |..||..:                     .
pombe   203 STFGSPSRSSIDSSTYLPRSKS---------VNSLSSNFSART---------------------P 237

  Fly   701 AQMQAAVAAATAAGGMPPADDHAISSHTSAAQYEQHEQQQHEQQQLQAAAAAAGVAQNYKMSETI 765
            |..|::|:...   |..|..||..:|.| .:.:...:..||:                  ..|||
pombe   238 ASNQSSVSEDF---GAAPNCDHKHNSVT-LSDFALPDIDQHD------------------TVETI 280

  Fly   766 RKRQYRVGLNLFNKKPEKGITYLIRRGFLENTP----QGVARFLITRKGLSRQMIGEYLGNLQNQ 826
            .::                :.:.|.:.|   ||    ||.:..|       :..:.:||      
pombe   281 LEK----------------VEFTIPKQF---TPAILSQGTSSLL-------KLCLRKYL------ 313

  Fly   827 FNMAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQKIERLMEIFSQRYCECNADIVGRLRSS 891
             ::....|.::         |:|||||.|.:.:|.|.|:|:|::..||.:|..||.|:..   ||
pombe   314 -SVVNFKCISL---------DMALRKFLAVYVLPNETQQIDRVLSTFSDQYFHCNPDLYD---SS 365

  Fly   892 DTIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRGIDDCHDIDKDMLMGIYDRV------- 949
            |..::|.|::::|:||..  |:...::|...:||.|    .:...|..::|...||.:       
pombe   366 DECYILTFSLMILHTDFF--NIHNRQKMTRAEFISN----TNLPTILPEILECFYDNITYTPFVH 424

  Fly   950 ------------------------------KSDEFKPGSDHVTQVMKVQATIVGKKPNL------ 978
                                          |.:.|...|||  |.::.|.|  |.:.||      
pombe   425 VEHIGCVVTSPSNEKPSLSQRLGDSQFRLTKRNTFATESDH--QALQEQLT--GFRINLDSILDL 485

  Fly   979 -------------------------ALPHRRLV-------CYCRLYEIPDVNKKERPGVHQREVF 1011
                                     ..|..::|       .:...:|....::...|.:...:||
pombe   486 KKIDSVRTSIESPTRTADDLYKEFARAPFLQIVSHRSQPQAFSYHFEPSAESESTNPAIINVKVF 550

  Fly  1012 -----LFNDLLVITKIFSKKKTSVTYT------FRNSFPLCGTVVTLLDM-------PNY----- 1053
                 :.|:.:...::.|.::..|..|      |:|.:.:.|.:..|.|.       |.|     
pombe   551 KLGILIQNEKVRKDRLLSNREVGVILTSSQLMFFKNVYWISGLLDQLEDFKRSHSFSPCYFSPHL 615

  Fly  1054 -----PFCIQLSQKV---DG----KILITFNARNEHDRCKFAEDLKESISEMDEMESLRIEAELE 1106
                 .:.|.||..|   ||    ..|.:|:.:.::.|....     |::.:||:....::....
pombe   616 TSLSADYIIPLSDLVAYGDGSRIENELYSFSVKQKNQRTHVF-----SVTNVDELNDWLVKINFV 675

  Fly  1107 RQKSARNRAPGN----AENRDSGV-ADVEVCPCPYQQG---SQASGEQAPNSADNSQQLKRSALS 1163
            ...:....||..    .|:.|..: |.|.|.|..|:..   |:||.|......:.| :::...:.
pombe   676 STFATAGLAPRERLPCVESSDKSIKASVSVLPDIYEDSDAMSKASKETRSEVLECS-KVRVYIVQ 739

  Fly  1164 NSLLDMHEQFGNEKPQRRGSVGSLDSGMSISFQSTTTSSASRENAAAIAAAANAAAAAKMRFNMP 1228
            |.:..:.|..      |:|     :|.|::          .|.|||.|.......:..::|    
pombe   740 NRIYKLEEAL------RQG-----ESKMTV----------QRRNAANILHLEPIQSRTRIR---- 779

  Fly  1229 PTAAIATPSNVYAAPGMQAYTHANFVQQSQAAYMLQQQ------QMLQQQAQMQAQAQ 1280
                :|..||.              ::::..|.|::.|      :.|::..:|.:..|
pombe   780 ----LARCSNT--------------LKKNMLAQMIEIQKFKISIKFLKEDLEMDSHLQ 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:279680 46/228 (20%)
PH_IQSEC 981..1108 CDD:270128 29/168 (17%)
sec74NP_594894.2 Sec7 <308..422 CDD:279680 38/138 (28%)
PH 549..676 CDD:278594 25/131 (19%)
PH 549..676 CDD:214574 25/131 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10663
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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