DRSC/TRiP Functional Genomics Resources

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Protein Alignment siz and agef-1

DIOPT Version :10

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001021798.2 Gene:agef-1 / 173231 WormBaseID:WBGene00012386 Length:1594 Species:Caenorhabditis elegans


Alignment Length:294 Identity:90/294 - (30%)
Similarity:145/294 - (49%) Gaps:29/294 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   728 TSAAQYEQHEQQQHEQQQLQAAAAAAGVAQNYKMSETIR--KRQYRVGLNLFNKKPEKGITYLIR 790
            ||.....:..:|||              .:.::..||::  |.....|:.:|::||:||:.:|..
 Worm   487 TSDIDDAEPSEQQH--------------GETFEAFETLKQQKNLMEQGIQIFSEKPKKGLKFLQE 537

  Fly   791 RGFLENTPQGVARFLITRKGLSRQMIGEYLGNLQNQFNMAVLSCFAMELDLSGRQVDVALRKFQA 855
            .||:......||.|::..:.|::..:|::||: .::||.:|:..:...||.|...:..|||.|..
 Worm   538 HGFVGTDAVEVAEFMMKEERLNKTQVGDFLGD-SDEFNNSVMHAYIDFLDFSSIDILAALRMFLE 601

  Fly   856 YFRMPGEAQKIERLMEIFSQRYCECNADIVGRLRSSDTIFVLAFAIIMLNTDLHTPNLKPERRMR 920
            .||:|||||||:|||..|:.||.:||.. .|...|:|..:||||:||||.||||...:|  .:|.
 Worm   602 KFRLPGEAQKIDRLMLKFASRYLDCNPR-QGIFASADAAYVLAFSIIMLTTDLHNKTVK--NKMT 663

  Fly   921 VEDFIKNLRGIDDCHDIDKDMLMGIYDRVKSDEFKPGS-------DHVTQVMKVQATIVGKKPNL 978
            .:.:|...|||::..:|..::|..|::.:..:|.|..:       ..||......||...::...
 Worm   664 KQGYINMNRGINEGGNIPVELLEAIFEDISKNEIKMRAGATALLRSRVTPGQGALATDKERRAMA 728

  Fly   979 ALPHRRLVCYCR--LYEIPDVNKKERPGVHQREV 1010
            ||....|....|  :....|.:....|..||..|
 Worm   729 ALEMEALSETARALMESASDADAYFTPAQHQHHV 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:460178 68/189 (36%)
PH_IQSEC 981..1108 CDD:270128 7/32 (22%)
agef-1NP_001021798.2 PLN03076 18..1476 CDD:215560 90/294 (31%)

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