DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment siz and step

DIOPT Version :10

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_061517935.1 Gene:step / 1275590 VectorBaseID:AGAMI1_006207 Length:752 Species:Anopheles gambiae


Alignment Length:778 Identity:190/778 - (24%)
Similarity:315/778 - (40%) Gaps:193/778 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 QQPRVTIMAGPAGAASPGLSRTPPTR-------SLSMRERRQ--LDCSPIPRSQSGASPASISSS 469
            |:..|.:.:......|||...|.|||       |.|..||..  ..|..:...:...:..|||::
Mosquito    48 QKSCVDLPSATTNGGSPGPFGTLPTRLDEVVSTSSSTIERPSPACTCEYVQVFEPPETTGSISTT 112

  Fly   470 TVSTSALASHPHVNLLHAAEPHYYNAQALPQGAAYYTSYHGSPHDLSYASSADTSLNASWVNTSG 534
            ...|..::.            |:.:|..|.:.|:       |..:|:.:|:|.:.|..:   .:|
Mosquito   113 ATITKTVSR------------HHQHADKLLESAS-------SDSNLALSSAASSPLEGA---ANG 155

  Fly   535 HSPHTPYYSAAQIYMRPK-----GGSTTPTPSCSGSTGSGSGGSGSGSSKKVPPEVPKRTSSITA 594
            ..|    |:...:..|.:     |..|..|.:                          :|:.:..
Mosquito   156 LQP----YATNSLRRRKEQQVVYGAKTVTTVT--------------------------KTTVLNR 190

  Fly   595 QQQTQLLLLQRQTPPPPSLLRTN----GLCKTAENGSLTSVQSS---GSDSSV---------TSA 643
            |:..::.|:....   ..||.:|    .|.:.::...|.::::.   |..|::         .:.
Mosquito   191 QRTYRVGLIFSDN---GELLNSNLDLRQLVEESKRNFLNALENGVPVGDGSAIPPPPRLAQEPAK 252

  Fly   644 ERNLNSDLGSDRSNSPHTWKRGTALNSSQ-QFSTHSAD--------SAGAVSGGGVGVAGGAGVY 699
            |.|.|..| .:.:..|...::.:.|:.|. .|...|||        ....||...||:       
Mosquito   253 EANNNERL-KEAARRPELQQQFSILDDSNFDFIDDSADLFNRNYPHQPPPVSASSVGL------- 309

  Fly   700 AAQMQAAVAAATAAGGMPPADDHAIS---------SHTSAAQYEQHEQQQHEQQ------QLQAA 749
              :.::.|||||:||.   |....|:         .:.|...|::...|.|.:|      ::::.
Mosquito   310 --EPRSLVAAATSAGA---ASTFPITKVLRMCNNCKNRSNLVYQRSCSQPHRKQINDELNEVESE 369

  Fly   750 AAAAGVAQNYKMSETIRKRQYRVGLNLFNKKPEKGITYLIRRGFLENTPQGVARFLITRKGLSRQ 814
            ..|....:..|.|.  :.:|..:|...||..|:|||.:|.....|...||.||:||...:||::.
Mosquito   370 MKAHESKEENKHSN--KDKQMALGRKKFNMDPKKGIEFLYENQLLRTDPQDVAQFLYKGEGLNKT 432

  Fly   815 MIGEYLGNLQNQFNMAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQKIERLMEIFSQRYCE 879
            .||:|||. :|.||..||..|....|.:...:..|||:|...||:|||||||:|:||.|:||||:
Mosquito   433 AIGDYLGE-KNDFNEQVLKAFVELHDFTNLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQ 496

  Fly   880 CNADIVGRLRSSDTIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRGIDDCHDIDKDMLMG 944
            .|.||   ..::||.:||:||||||||.||.|::|  .:..||.||...|||::..|:.:::|..
Mosquito   497 LNPDI---FTNTDTCYVLSFAIIMLNTSLHNPSVK--EKPTVEQFISMNRGINNGGDLPRELLES 556

  Fly   945 IYDRVKSDEFKPGSDHVTQVMKVQATIVGKKPNLALPHRRLVCYCRLYEIPDVNKKE-------- 1001
            :|:.::::.||...|....:|                        ..:..||   ||        
Mosquito   557 LYESIRAEPFKIPQDDGNDLM------------------------HTFFNPD---KEGWLWKQGG 594

  Fly  1002 RPGVHQREVFLFNDLLVITKIFSKKKTSVTYTFRNSFPLCGTVVTLLDMPNYPFCIQL------- 1059
            |....:|..|:.||..:....::..|..     |...||....|..:...:.|.|.:|       
Mosquito   595 RYKSWKRRWFILNDNCLYYFEYTTDKEP-----RGIIPLENIAVREVTDRSKPHCFELHASGGAD 654

  Fly  1060 ----------SQKVDGK-ILITFNARNEHDRCKFAEDLKESISEMDEMESLRIEAELERQKSA 1111
                      .:.|:|| .:...:|..|.::.::...|.:|||.....:.|     ::|:|.|
Mosquito   655 IIKACKTDSEGKVVEGKHTVYRMSAATEEEQQEWITRLNQSISHNPFHDIL-----VQRKKKA 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:460178 80/187 (43%)
PH_IQSEC 981..1108 CDD:270128 27/152 (18%)
stepXP_061517935.1 None

Return to query results.
Submit another query.