DRSC/TRiP Functional Genomics Resources

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Protein Alignment siz and Cyth1

DIOPT Version :10

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_063124376.1 Gene:Cyth1 / 116691 RGDID:620397 Length:400 Species:Rattus norvegicus


Alignment Length:248 Identity:95/248 - (38%)
Similarity:148/248 - (59%) Gaps:18/248 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   724 ISSHTSAAQYEQHEQQQHEQQQLQA--------AAAAAGVAQNYKMSE----TIRKRQYRVGLNL 776
            :.|..:|.:.::.|..:..:|:|.|        .|..|...::...:|    ..|.:|..:|...
  Rat    11 VPSDLTAEERQELENIRRRKQELLADIQRLKEEIAEVANEIESLGSTEERKNMQRNKQVAMGRKK 75

  Fly   777 FNKKPEKGITYLIRRGFLENTPQGVARFLITRKGLSRQMIGEYLGNLQNQFNMAVLSCFAMELDL 841
            ||..|:|||.:||..|.|:||.:.:|:||...:||::..||:|||. :::|::.||..|....:.
  Rat    76 FNMDPKKGIQFLIENGLLKNTCEDIAQFLYKGEGLNKTAIGDYLGE-RDEFSIQVLHAFVELHEF 139

  Fly   842 SGRQVDVALRKFQAYFRMPGEAQKIERLMEIFSQRYCECNADIVGRLRSSDTIFVLAFAIIMLNT 906
            :...:..|||:|...||:|||||||:|:||.|:||||:||   .|..:|:||.:||:||||||||
  Rat   140 TDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQCN---TGVFQSTDTCYVLSFAIIMLNT 201

  Fly   907 DLHTPNLKPERRMRVEDFIKNLRGIDDCHDIDKDMLMGIYDRVKSDEFKPGSD 959
            .||.||:|.  :..||.||...|||:|..|:.:::|..:|:.:|::.||...|
  Rat   202 SLHNPNVKD--KPTVERFIAMNRGINDGGDLPEELLRNLYESIKNEPFKIPED 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:460178 83/187 (44%)
PH_IQSEC 981..1108 CDD:270128
Cyth1XP_063124376.1 None
Blue background indicates that the domain is not in the aligned region.

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