DRSC/TRiP Functional Genomics Resources

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Protein Alignment siz and Gbf1

DIOPT Version :10

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_006526643.1 Gene:Gbf1 / 107338 MGIID:1861607 Length:1862 Species:Mus musculus


Alignment Length:460 Identity:114/460 - (24%)
Similarity:199/460 - (43%) Gaps:88/460 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   766 RKRQYRVGLNLFNKKPEKGITYLIRRGFL----ENTPQGVARFLITRKGLSRQMIGEYLGNLQNQ 826
            :|:....|...||:||:|||.:|..:|.|    :||.  ||::|.....|.::||||::.:.:  
Mouse   700 KKKLLITGTEQFNQKPKKGIQFLQEKGLLTIPMDNTE--VAQWLRENPRLDKKMIGEFVSDRK-- 760

  Fly   827 FNMAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQKIERLMEIFSQRYCECNADIVGRLRSS 891
             ||.:|..|.......|.::|.|||.:...||:||||..|.||:|:|::.:..||.   ....:|
Mouse   761 -NMDLLESFVSTFSFQGLRLDEALRLYLEAFRLPGEAPVIHRLLEVFTEHWRSCNG---SPFANS 821

  Fly   892 DTIFVLAFAIIMLNTDLHTPNLKPERR-MRVEDFIKNLRGIDDCHDIDKDMLMGIYDRVKSDEFK 955
            |..|.||:|:||||||.|..|::.:.. |.:|:|.|||:|::...|.::|:|..:|..:|::|. 
Mouse   822 DACFALAYAVIMLNTDQHNHNVRKQNAPMTLEEFRKNLKGVNGGKDFEQDILEDMYHAIKNEEI- 885

  Fly   956 PGSDHVTQVMKVQATIVGKKPNL--ALPHRRLVCYCRLYEIPDVNKKERPGVHQREVFLFN---D 1015
                    ||..:.|.:.::..:  .|.||..........:|       ||.:..::|...   .
Mouse   886 --------VMPEEQTGLVRENYVWSVLLHRGASPEGVFLRVP-------PGSYDLDLFTMTWGPT 935

  Fly  1016 LLVITKIFSKK-----------------KTSVTYTFRNSF-----PLCG-TVVTLLDMPNYPFCI 1057
            :..::.:|.|.                 ..|..|...:.|     .||. |.::...:.|.|...
Mouse   936 IAALSYVFDKSLEETIIQKAISGFRKCAMISAHYGLSDVFDNLIISLCKFTALSSESIENLPSVF 1000

  Fly  1058 QLSQKVDGKILITFNARNEHD---------------RCKFAEDLKESISEMDEMESLRIEAELER 1107
            ..:.|........|:..:.|.               :...|:.|.:::.|:::......:..|:|
Mouse  1001 GSNPKAHIAAKTVFHLAHRHGDILREGWKNIMEAMLQLFRAQLLPKAMVEVEDFVDPNGKISLQR 1065

  Fly  1108 QKSARNRAPGNAENRDSGVADVEVCPCPYQQGSQASGEQAPNSADNSQQLKRSALSNSLLDMHEQ 1172
            :::..||......:..|.:.         ..|.:.|..:.|::  .:|:.||.|     ||..:|
Mouse  1066 EETPSNRGESTVLSFVSWLT---------LSGPEQSSVRGPST--ENQEAKRVA-----LDCIKQ 1114

  Fly  1173 FGNEK 1177
            ...||
Mouse  1115 CDPEK 1119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:460178 70/192 (36%)
PH_IQSEC 981..1108 CDD:270128 23/167 (14%)
Gbf1XP_006526643.1 PLN03076 <430..>1179 CDD:215560 114/460 (25%)
Sec7 700..885 CDD:460178 70/192 (36%)
PHA03247 <1730..1860 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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