DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment siz and ARFGEF2

DIOPT Version :9

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_006411.2 Gene:ARFGEF2 / 10564 HGNCID:15853 Length:1785 Species:Homo sapiens


Alignment Length:776 Identity:182/776 - (23%)
Similarity:294/776 - (37%) Gaps:210/776 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 TIQRAFRHYMMVKKFASITAMAKAEKRLSRRMVVTASSLGLAEEGASSSSAYGSATESQLTEQQQ 406
            |::..:..|:..|...:.|. |||.......::.|                   ..|:|:.::.:
Human   162 TVRTCYNIYLASKNLINQTT-AKATLTQMLNVIFT-------------------RMENQVLQEAR 206

  Fly   407 QQQAQQQQQPRVTIMAGPAGAASPGLSR-----------TPPTRSLSMRERRQLDCSPIPRSQSG 460
            :.:...|.:|:..::  .|.|.||...|           ||....|:..|..:.|...: .:::|
Human   207 ELEKPIQSKPQSPVI--QAAAVSPKFVRLKHSQAQSKPTTPEKTDLTNGEHARSDSGKV-STENG 268

  Fly   461 ASPASISSSTVSTSALASHPHVNLL---------HAAEPHYYNAQ------------ALPQGAAY 504
            .:|....||...|...|.....::|         .|||.|.....            |:|.|...
Human   269 DAPRERGSSLSGTDDGAQEVVKDILEDVVTSAIKEAAEKHGLTEPERVLGELECQECAIPPGVDE 333

  Fly   505 YTSYHGSPHDLSYASSADTSLNASWVNTSGHS-----PHT-------PYYSAAQIYMRPKGGSTT 557
            .:..:|...|....|||| :|.:   :..||.     .|.       .:.|..::.|:|.|    
Human   334 NSQTNGIADDRQSLSSAD-NLES---DAQGHQVAARFSHVLQKDAFLVFRSLCKLSMKPLG---- 390

  Fly   558 PTPSCSGSTGSGSGGSGSGSSKKVPPEVPKRTSSITAQQQTQLLLLQRQTPPPPSLLRTNGLCKT 622
                                  :.||: ||.....:.....||||...|...|  :.||:.:...
Human   391 ----------------------EGPPD-PKSHELRSKVVSLQLLLSVLQNAGP--VFRTHEMFIN 430

  Fly   623 AENGSLTSVQSSGSDSSVTSA----------------------------ERNLNSDLGSDRSNSP 659
            |....|....|....|||...                            |..||. |.:..|:..
Human   431 AIKQYLCVALSKNGVSSVPDVFELSLAIFLTLLSNFKMHLKMQIEVFFKEIFLNI-LETSTSSFE 494

  Fly   660 HTWKRGTALNSSQQFSTHSADSAGAVSGGGVGVAGGAGVYAAQM------QAAVAAATAAG---G 715
            |.|.      ..|..:...||:...|.   :.|.....:.||.:      ..:..|...:|   |
Human   495 HRWM------VIQTLTRICADAQCVVD---IYVNYDCDLNAANIFERLVNDLSKIAQGRSGHELG 550

  Fly   716 MPPADDHAI--------------------------SSHTSAAQYEQHEQQQHEQQQLQAAAAAAG 754
            |.|..:.::                          :..||..|....:|:..:.:.|..|...:.
Human   551 MTPLQELSLRKKGLECLVSILKCMVEWSKDLYVNPNHQTSLGQERLTDQEIGDGKGLDMARRCSV 615

  Fly   755 VAQNYKMS--------------ETIRKRQYRV--GLNLFNKKPEKGITYLIRRGFLENTPQGVAR 803
            .:....:|              |.|::::..:  |:.||||||::||.:|..:|.|..:.:.:|:
Human   616 TSMESTVSSGTQTTVQDDPEQFEVIKQQKEIIEHGIELFNKKPKRGIQFLQEQGMLGTSVEDIAQ 680

  Fly   804 FLITRKGLSRQMIGEYLGNLQNQFNMAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQKIER 868
            ||...:.|....:|::||: ..:||..|:..:..:||...::...|||.|...||:|||||||:|
Human   681 FLHQEERLDSTQVGDFLGD-SARFNKEVMYAYVDQLDFCEKEFVSALRTFLEGFRLPGEAQKIDR 744

  Fly   869 LMEIFSQRYCECNADIVGR--LRSSDTIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRGI 931
            |||.|:.||.|||.   |:  ..|:||.:|||::||||.||||:|.:|  .:|..|.:||..|||
Human   745 LMEKFAARYIECNQ---GQTLFASADTAYVLAYSIIMLTTDLHSPQVK--NKMTKEQYIKMNRGI 804

  Fly   932 DDCHDIDKDMLMGIYDRVKSDEFKPGSDHVTQVMK--VQATIVGK--KPNLALPHRRLVCY 988
            :|..|:.::.|..||:.::..:.         .||  .:.||..|  |.|:|...:|.:.|
Human   805 NDSKDLPEEYLSSIYEEIEGKKI---------AMKETKELTIATKSTKQNVASEKQRRLLY 856

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:279680 76/191 (40%)
PH_IQSEC 981..1108 CDD:270128 2/8 (25%)
ARFGEF2NP_006411.2 DCB, DCB:DCB domain and DCB:HUS domain interaction 2..224 12/83 (14%)
PLN03076 11..1711 CDD:215560 182/776 (23%)
DCB 28..198 CDD:292830 8/55 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..285 11/53 (21%)
Sec7_N 370..524 CDD:289549 34/192 (18%)
HUS, DCB:HUS domain interaction 508..528 5/22 (23%)
Sec7 643..827 CDD:279680 76/189 (40%)
DUF1981 1167..1248 CDD:286414
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1514..1535
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148865
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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