DRSC/TRiP Functional Genomics Resources

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Protein Alignment siz and cyth3b

DIOPT Version :10

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_021330428.1 Gene:cyth3b / 100537448 ZFINID:ZDB-GENE-130530-529 Length:396 Species:Danio rerio


Alignment Length:369 Identity:112/369 - (30%)
Similarity:176/369 - (47%) Gaps:93/369 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   764 TIRKRQYRVGLNLFNKKPEKGITYLIRRGFLENTPQGVARFLITRKGLSRQMIGEYLGNLQNQFN 828
            |.|.:|..:|...||..|:|||.:|:....|:.||:.:|:||...:||::.:||:|||. :::||
Zfish    61 TQRNKQIAMGRKKFNMDPKKGIQFLLENDLLQQTPEDIAQFLYKGEGLNKTVIGDYLGE-RDEFN 124

  Fly   829 MAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQKIERLMEIFSQRYCECNADIVGRLRSSDT 893
            :.||..|....:.:...:..|||:|...||:|||||||:|:||.|:.|||:||.   |..:|:||
Zfish   125 IKVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQKIDRMMEAFASRYCQCNP---GVFQSTDT 186

  Fly   894 IFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRGIDDCHDIDKDMLMGIYDRVKSDEFK--- 955
            .:||:||||||||.||.||::.  :..||.||...|||:|..|:.:::|..:|:.:||:.||   
Zfish   187 CYVLSFAIIMLNTSLHNPNVRD--KPAVERFISMNRGINDGGDLPEELLRNLYESIKSEPFKIPE 249

  Fly   956 -PGSDHVTQVMKVQATIVGKKPNLALPHRRLVCYCRLYEIPDVNKKERPGVHQREVFLFNDLLVI 1019
             .|:|                    |.|        .:..||           ||.:|.      
Zfish   250 DDGND--------------------LTH--------TFFNPD-----------REGWLL------ 269

  Fly  1020 TKIFSKKKT----------SVTYTF--------RNSFPLCGTVVTLLDMPNYPFCIQL------- 1059
             |:..:.||          :..|.|        |...||....:..::.|..|.|.:|       
Zfish   270 -KLGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEEPRKPNCFELYNPNHKG 333

  Fly  1060 ------SQKVDGK------ILITFNARNEHDRCKFAEDLKESIS 1091
                  ..:.||:      ::...:|....::.::.:.:|.|||
Zfish   334 QVIKACKTEADGRVVEGNHVVYRISAPTPEEKEEWIKSIKASIS 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:460178 81/187 (43%)
PH_IQSEC 981..1108 CDD:270128 25/148 (17%)
cyth3bXP_021330428.1 Sec7 63..245 CDD:460178 81/187 (43%)
PH_GRP1-like 260..379 CDD:269954 24/136 (18%)

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