DRSC/TRiP Functional Genomics Resources

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Protein Alignment siz and arfgef2

DIOPT Version :10

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_002933226.3 Gene:arfgef2 / 100492055 XenbaseID:XB-GENE-6041969 Length:1792 Species:Xenopus tropicalis


Alignment Length:390 Identity:125/390 - (32%)
Similarity:178/390 - (45%) Gaps:87/390 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   607 TPPPPSLLRTNGL-CKTAENGSLTSVQSSGSD-SSVTSAERNLNSDLGSDRSNSPHTWKRGTALN 669
            ||.....||..|| |       |.|:.....: |.......|..|:||.::::.|.:.:..|...
 Frog   556 TPTQELCLRKKGLEC-------LVSILKCMVEWSKDLYVNPNFQSNLGQEKNSDPESCENKTPET 613

  Fly   670 SSQQFSTHSADSAGAVSGGGVGVAGGAGVYAAQMQAAVAAATAAGGMPPADDHAISSHTSAAQYE 734
            :.:::|..|.||.         |:.|.|..:.|...            |.|..         |:|
 Frog   614 TGRRYSVSSKDST---------VSSGIGSTSTQTSI------------PDDPE---------QFE 648

  Fly   735 QHEQQQHEQQQLQAAAAAAGVAQNYKMSETIRKRQYRVGLNLFNKKPEKGITYLIRRGFLENTPQ 799
            ..:||:                      |.|..     |:.||||||::|:.||..:|.|...||
 Frog   649 VIKQQK----------------------EIIEH-----GIELFNKKPKRGMQYLQEQGMLGTMPQ 686

  Fly   800 GVARFLITRKGLSRQMIGEYLGNLQNQFNMAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQ 864
            .:|:||.....|....|||:||. .|:||..|:..:..:||...:....|||.|...||:|||||
 Frog   687 DIAQFLHQEDRLDFTQIGEFLGE-NNRFNREVMYAYVDQLDFCDKDFVSALRMFLEGFRLPGEAQ 750

  Fly   865 KIERLMEIFSQRYCECNADIVGR--LRSSDTIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKN 927
            ||:||||.|:.||.|||.   |:  ..|:||.:|||::||||.||||:|.:|  .:|..|.:||.
 Frog   751 KIDRLMEKFAARYLECNQ---GQTLFASADTAYVLAYSIIMLTTDLHSPQVK--NKMTKEQYIKM 810

  Fly   928 LRGIDDCHDIDKDMLMGIYDRV--KSDEFKPGSDHVTQVMKVQATIVGK--KPNLALPHRRLVCY 988
            .|||:|..|:.::.|..|||.:  |....|...:|         ||..|  ||::|...:|.:.|
 Frog   811 NRGINDSKDLPEEYLSSIYDEIEGKKIAMKETKEH---------TIATKSTKPSVASEKQRRLLY 866

  Fly   989  988
             Frog   867  866

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:460178 83/191 (43%)
PH_IQSEC 981..1108 CDD:270128 2/8 (25%)
arfgef2XP_002933226.3 PLN03076 6..1706 CDD:215560 125/390 (32%)

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