DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment siz and iqsec2

DIOPT Version :9

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_002941016.2 Gene:iqsec2 / 100485600 XenbaseID:XB-GENE-6035762 Length:1370 Species:Xenopus tropicalis


Alignment Length:1285 Identity:416/1285 - (32%)
Similarity:576/1285 - (44%) Gaps:317/1285 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 QQQQQQHLQQQQHLHQTGAGHYMQVTATGG-GQY--HHHHM------LHG--HGHHAHHHGGAV- 259
            ::.|...::::||     ...|...:..|| |.|  ||||.      .||  |.||...|.|.. 
 Frog    63 REHQSVRVEREQH-----RAEYRGESGGGGCGTYGHHHHHRGDNPQGYHGQPHQHHRAPHRGPTR 122

  Fly   260 -VIAGSGVGTGLGSGATSVIMQHQQQQQQQQNMHKKNSIRNGGDVL------------------- 304
             ...|.|..|. .|.||:  :|.:...:..:.|..:     |||.|                   
 Frog   123 STSPGGGHSTN-NSPATT--LQRKSDSENSRTMSVE-----GGDSLGSESGTIVDSPGQQPPYRG 179

  Fly   305 --------------------------------------------KRTRAQS-AYELSQDLLEKQI 324
                                                        ||::|.| :||||.||.:|::
 Frog   180 EVKSDHYDLPSPTRHPSHPGLQWSQRARLQPASVALRKQEEEENKRSKALSDSYELSTDLQDKKV 244

  Fly   325 ELLERKYGG-VRARNAAVTIQRAFRHYMMVKKFASITAMAKAEKRLSRRMVVTASSLGLAEEGAS 388
            |:||||||| ..:|.||.|||.|||.|.|.|.|..:.:.| :|.|:|||::::...:..:.|   
 Frog   245 EMLERKYGGYFLSRRAARTIQTAFRQYRMNKNFERLRSSA-SESRMSRRIILSNMRMQYSFE--- 305

  Fly   389 SSSAYGSATESQLTEQQQQQQAQQQQQPRVTIMAGPAGAASPGLSRTPPTRSLSMRERRQLDCSP 453
                          |..:...|...|...|::..|.|.....|      .|.|            
 Frog   306 --------------EYDKSHNAPYFQGKPVSLDEGVAACHGQG------ERGL------------ 338

  Fly   454 IPRSQSGASPASISSSTVSTSALASHPHVNLLHAAEPHYYNAQALPQGAAYYTSYHGSPHDLSYA 518
                |.|.|.:.:...:::||.    ...|.:...|..:                  |....|.|
 Frog   339 ----QYGGSCSGMDGDSINTSG----EFCNEITELEDSF------------------SKQVKSLA 377

  Fly   519 SSADTSLNASWVNTSGHSPHTPYYSAAQIYMRPKGGSTTPTPSCSGSTGSGSGGSGSGSSKKVPP 583
            .|.|.:|:...::.|  .|.....|..:...|.:.|.:|.|.....:.....|...|..|...||
 Frog   378 ESIDDALSCRSMHCS--DPRDDKGSLEKGESRDQHGDSTATSFSDVTLYMDEGVPVSPISLDRPP 440

  Fly   584 ----EVPKRTSSITAQQQTQLLLLQRQTPPPPSLLRTNGLCKTAENGSLTSVQ------------ 632
                :.|:.|||             ||.....|..|.:    :.||||..|..            
 Frog   441 SSDQDTPQGTSS-------------RQEYWATSSSRED----SRENGSRRSTPCMECRDFRMRGA 488

  Fly   633 -------SSGSDSSVTSAER----NLNSDLGSDRSN-SPH-TWKRGTALNSSQQFSTH------- 677
                   ...|||||..::|    :||..:..::.| ||| |.|:.......:..:.|       
 Frog   489 HLPLLTIEPPSDSSVDLSDRSDRGSLNRQVVYEQENCSPHGTLKQAPHKGPVRSPNPHRHYHPEP 553

  Fly   678 ---SADSAGAVSG--GGVGVAGGAGVYAAQMQAAVAAATAAGGMPPADDHAISSHTSAAQ----- 732
               ..|:.|..:|  ||||..|..||.............:.|     |:.:::|.|::.:     
 Frog   554 PPPPTDNVGGNNGTTGGVGGGGMGGVRHMHHGKPELGENSDG-----DNESLNSTTNSNETINCS 613

  Fly   733 --YEQHEQQQHEQQQLQAAAAAAGVAQNYKM------------SETIRKRQYRVGLNLFNKKPEK 783
              ...|:..:.....|        ..|.|:.            ::.:::||||:|||||||||||
 Frog   614 SGSSSHDSLREPTNTL--------CKQTYQRETRHSWDSPAFNNDVVQRRQYRIGLNLFNKKPEK 670

  Fly   784 GITYLIRRGFLENTPQGVARFLITRKGLSRQMIGEYLGNLQNQFNMAVLSCFAMELDLSGRQVDV 848
            ||.|||.||||.:||.|||.|::.|||||||||||:|||.|.|||..||.|...|:|.|...:|.
 Frog   671 GIQYLIERGFLSDTPVGVAHFILERKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSNMDLDE 735

  Fly   849 ALRKFQAYFRMPGEAQKIERLMEIFSQRYCECNADIVGRLRSSDTIFVLAFAIIMLNTDLHTPNL 913
            |||||||:.|:.|||||:|||:|.||||||.||..:|.:.|:.||||:||||||:||||:::|::
 Frog   736 ALRKFQAHIRVQGEAQKVERLIEAFSQRYCVCNPVLVRQFRNPDTIFILAFAIILLNTDMYSPSV 800

  Fly   914 KPERRMRVEDFIKNLRGIDDCHDIDKDMLMGIYDRVKSDEFKPGSDHVTQVMKVQATIVGKKPNL 978
            ||||:|:::||||||||:|:..||.:|:|:|||.|::..|.:...|||:||..|:..||||||.|
 Frog   801 KPERKMKLDDFIKNLRGVDNGEDIPRDLLVGIYQRIQGRELRTNDDHVSQVQAVERMIVGKKPVL 865

  Fly   979 ALPHRRLVCYCRLYEIPDVNKKERPGVHQREVFLFNDLLVITKIFSKKKTSVTYTFRNSFPLCGT 1043
            :||||||||.|:|||:||.|:.:|.|:|||||||||||||:||||.|||..|||:||.||||...
 Frog   866 SLPHRRLVCCCQLYEVPDPNRPQRMGLHQREVFLFNDLLVVTKIFQKKKILVTYSFRQSFPLVDM 930

  Fly  1044 VVTLLDMPNYPFCIQLSQKVDG---KILITFNARNEHDRCKFAEDLKESISEMDEMESLRIEAEL 1105
            .:.|.....|.:.|:|...|.|   |:||.|||.:..||.:|..||:|||:|:.|||..|:|:||
 Frog   931 QMQLFQNSYYQYGIKLLSAVPGGERKVLIIFNAPSLQDRLRFTSDLRESIAEVQEMEKYRVESEL 995

  Fly  1106 ERQKSAR--NRAPGNAENRDSGVADVEVCPCPYQQGSQASGEQAPNSADNS----QQLKRSALSN 1164
            |:||...  |.:||      .|:.:.            .:|.....|.|::    :.|||||||:
 Frog   996 EKQKGVMRPNTSPG------PGIKEA------------VNGTLGRPSLDDTYALGEGLKRSALSS 1042

  Fly  1165 SLLDMHEQFGNEKPQRRGSVGSLDSGMSISFQST--------TTSSASRENAAAIAAAANAAAAA 1221
            ||.|:.|.   .|..||.|.|||||.:..|..|:        ....|..|...|....:|:::..
 Frog  1043 SLRDLSEA---GKRGRRNSAGSLDSTIEGSIISSPRPHQRIPPPPPAPPEEYKAPRPVSNSSSFL 1104

  Fly  1222 KMRF----------NMPPTAAIATPSNVYAAPGMQAYTHANFVQQSQAAYMLQQQQMLQQQAQMQ 1276
            ...|          ||.|:   :.|.:.:..|||.  ...:.:|...|.|...|..:.|......
 Frog  1105 GSLFGSKRGKGPFQNMNPS---SLPPHPHTPPGMP--EGQSKIQALHAQYFHNQGVLAQAPPPYH 1164

  Fly  1277 AQAQAQA-------------------QAQAQAQAQAQAQAQAQPLTGRIP 1307
            :|....|                   .:.||...|...|.:.||..|..|
 Frog  1165 SQPPTTAPPPQPHQPPPPPSHRYHVPPSSAQFTLQRPGQQKRQPPVGGTP 1214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:279680 119/187 (64%)
PH_IQSEC 981..1108 CDD:270128 74/129 (57%)
iqsec2XP_002941016.2 Sec7 653..841 CDD:366596 119/187 (64%)
IQ_SEC7_PH 861..993 CDD:374551 75/131 (57%)
PRK10263 <1191..>1291 CDD:236669 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 260 1.000 Domainoid score I1930
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 545 1.000 Inparanoid score I1134
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D360558at33208
OrthoFinder 1 1.000 - - FOG0002052
OrthoInspector 1 1.000 - - otm48656
Panther 1 1.100 - - LDO PTHR10663
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X920
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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