DRSC/TRiP Functional Genomics Resources

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Protein Alignment siz and cyth2

DIOPT Version :10

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_004916381.1 Gene:cyth2 / 100379752 XenbaseID:XB-GENE-5834088 Length:405 Species:Xenopus tropicalis


Alignment Length:413 Identity:118/413 - (28%)
Similarity:194/413 - (46%) Gaps:75/413 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   737 EQQQHEQQQLQAAAAAAGVAQNYKMSETIRKRQYRVGLNLFNKKPEKGITYLIRRGFLENTPQGV 801
            |.|:...:..:|.....|:..|.......|.|:..:|...||..|:|||.||.....|.|||:.:
 Frog    32 EIQRLRDELSEAMNEVEGLEANEGSKTLQRNRKMGMGRKKFNMDPKKGIVYLQENELLRNTPEDI 96

  Fly   802 ARFLITRKGLSRQMIGEYLGNLQNQFNMAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQKI 866
            ||||...:||::..||:|||. ::.||::||..|....:.:...:..|||:|...||:|||||||
 Frog    97 ARFLYKGEGLNKTAIGDYLGE-RDDFNISVLHSFVDLHEFTDLNLVQALRQFLWSFRLPGEAQKI 160

  Fly   867 ERLMEIFSQRYCECNADIVGRLRSSDTIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRGI 931
            :|:||.|:||||.||.   |..:|:||.:||:||:|||||.||.||::.  :..||.||...|||
 Frog   161 DRMMEAFAQRYCICNP---GVFQSTDTCYVLSFAVIMLNTSLHNPNVRD--KPGVERFISMNRGI 220

  Fly   932 DDCHDIDKDMLMGIYDRVKSDEFK----PGSDHVTQVMKVQATIVGKKPNLALPHRRLVCYCRLY 992
            :|..|:.:::|..:||.::::.||    .|:|                    |.|        .:
 Frog   221 NDGGDLPEELLRNLYDSIRNEPFKIPEDDGND--------------------LTH--------TF 257

  Fly   993 EIPD-----VNKKERPGVHQREVFLFNDLLVITKIFSKKKTSVTYTFRNSFPLCGTVVTLLDMPN 1052
            ..||     :....|....:|..|:..|..:....::..|..     |...||....:..::.|.
 Frog   258 FNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDKEP-----RGIIPLENLSIREVEDPR 317

  Fly  1053 YPFCIQL-------------SQKVDGKI------LITFNARNEHDRCKFAEDLKESIS-----EM 1093
            .|.|.:|             ..:.||::      :...:|....::.::.:.:|.::|     ||
 Frog   318 KPNCFELYIPNNKGQLIKACKTEADGRVVEGNHNVYRISAPTPEEKEEWIKSIKAAVSVDPFYEM 382

  Fly  1094 DEMESLRI---EAELERQKSARN 1113
            ......||   :.::::|:..::
 Frog   383 LAARKKRISVKKKQMQQQQQEQS 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:460178 83/187 (44%)
PH_IQSEC 981..1108 CDD:270128 24/158 (15%)
cyth2XP_004916381.1 Sec7 61..243 CDD:460178 83/187 (44%)
PH_GRP1-like 258..377 CDD:269954 19/123 (15%)

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