DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment siz and iqsec1

DIOPT Version :9

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001107304.1 Gene:iqsec1 / 100135093 XenbaseID:XB-GENE-997008 Length:1001 Species:Xenopus tropicalis


Alignment Length:1089 Identity:375/1089 - (34%)
Similarity:511/1089 - (46%) Gaps:273/1089 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 LLERKYGG-VRARNAAVTIQRAFRHYMMVKKFASITAMAKAEKRLSRRMVVTASSLGLAEEGASS 389
            :||||||| :.:|:||.|||.|||.|.|.|.|..:.: :.:|.|:|||:|::...:..:.||...
 Frog     1 MLERKYGGRLVSRHAARTIQTAFRQYQMNKNFERLRS-SMSENRMSRRIVLSNMRMQFSFEGPEK 64

  Fly   390 -SSAYGSATESQLT----EQQQQQQAQQQQQPRVTIMAGPAGA---------------------- 427
             .|:|....:..|:    :..:..|::...:...|.|..||.:                      
 Frog    65 VHSSYFEGKQVSLSNDGPKMGRMVQSECGDRGEQTAMKSPAASSDFADAITELEDAFSRQVKSLA 129

  Fly   428 -------------ASPGLSRTPPTRSLSMR-------------ERRQLD---------------- 450
                         |..|.| ..|.|...|.             :.|:||                
 Frog   130 ESIDDALNCRSLHADEGQS-ADPIRGREMERSSSGQLKAAHNLDHRKLDEMTASYSDVTLYIDEE 193

  Fly   451 --CSPIPRSQSGASPASISSSTVSTSALASHPHVNLLHAAEPHYYNAQALPQGAAYYTSYHGSPH 513
              ..|:|.||||....| :.|.:...::.|..:.::.|..:....:           ||...:| 
 Frog   194 ELSPPLPLSQSGDRTPS-TESELRLRSMNSQEYWSMTHKEDKLDTD-----------TSCRSTP- 245

  Fly   514 DLSYASSADTSLNASWVNTSGHSP----HTPYYSAAQIYMRPKGGST-------TPTPSCSGSTG 567
                  |.|...:.|.::   |.|    ..|..|:..:..|.:.||.       ...|:..||  
 Frog   246 ------SLDCQDHRSRID---HLPLLTIEPPSDSSVDLSDRSERGSVKRQNVYERGIPNQQGS-- 299

  Fly   568 SGSGGSGSGSSKKVPPEVPKRTSSITAQQQTQLLLLQRQTPPPPSLLRTNGLCKTAENGSLTSVQ 632
                          |..:|...:.|..:::.|    .|..|.|..       .:...||::....
 Frog   300 --------------PKHIPHIPTKILPREEEQ----PRHRPRPID-------AQLIINGTINRQS 339

  Fly   633 SSGSDSSVTSAERNLNSDLGSDRSNSPHTWKRGTALNSSQQFSTHSADSAGAVSGGGVGVAGGAG 697
            .|.||          .||..:|..||  |......:|.|.:                        
 Frog   340 KSESD----------YSDGDNDSINS--TSNSNDTINCSSE------------------------ 368

  Fly   698 VYAAQMQAAVAAATAAGGMPPADDHAISSHTSAAQYEQHEQQQHEQQQLQAAAAAAGVAQNYKMS 762
                                       ||..|..:....:|..|::.:....:.|..       :
 Frog   369 ---------------------------SSRDSLREQTLSKQTYHKETRNSWDSPAFS-------N 399

  Fly   763 ETIRKRQYRVGLNLFNKKPEKGITYLIRRGFLENTPQGVARFLITRKGLSRQMIGEYLGNLQNQF 827
            :.||||.||:|||||||||||||.|||.|||:.:||.|||.||:.|||||||||||:|||.|.||
 Frog   400 DVIRKRHYRIGLNLFNKKPEKGIQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQF 464

  Fly   828 NMAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQKIERLMEIFSQRYCECNADIVGRLRSSD 892
            |..||.|...|:|.|..::|.|||||||:.|:.|||||:|||:|.||||||.||..:|.:.|:.|
 Frog   465 NRDVLDCVVDEMDFSAMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPD 529

  Fly   893 TIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRGIDDCHDIDKDMLMGIYDRVKSDEFKPG 957
            |||:||||||:||||:::||:||||:|::|||:|||||:||..||.::.|:|||:|:...|.|..
 Frog   530 TIFILAFAIILLNTDMYSPNVKPERKMKLEDFVKNLRGVDDGEDIPRETLVGIYERIHKRELKTN 594

  Fly   958 SDHVTQVMKVQATIVGKKP----------NLALPHRRLVCYCRLYEIPDVNKKERPGVHQREVFL 1012
            .|||:||.||:..||||||          .|:||||||||||||:|:||.||.::.|:||||:||
 Frog   595 EDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFL 659

  Fly  1013 FNDLLVITKIFSKKKTSVTYTFRNSFPLCGTVVTLLDMPNYPFCIQLSQKVDG---KILITFNAR 1074
            ||||||:||||.|||.||||:||.||.|.|..|.|.:..|||..|:||..:.|   |:||.|||.
 Frog   660 FNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLYENHNYPNAIRLSSAIPGADVKVLINFNAP 724

  Fly  1075 NEHDRCKFAEDLKESISEMDEMESLRIEAELERQKSARNRAPGNAENRDSGVADVEVCPCPYQQG 1139
            |..||.||.:||:|||:|:.|||..|||:|||:||               ||    |.|...|..
 Frog   725 NTQDRKKFTDDLRESIAEVQEMEKYRIESELEKQK---------------GV----VRPSMSQSS 770

  Fly  1140 S--QASGEQAPNSA--DNS----QQLKRSALSNSLLDMHEQFGNEKPQRRGSVGSLDSGMSISFQ 1196
            |  :.||..|.|.|  |:|    :.|||||||:||.|:.|.   .|..||.|.|||||.|..|..
 Frog   771 SLKKDSGNGALNRACLDDSYATGEGLKRSALSSSLRDLSEA---GKRGRRSSAGSLDSNMEGSII 832

  Fly  1197 S---------TTTSSASRENAAAIAAAANAAAAAKMRFNMPPTAAIATPSNVYAAPGMQAYTHAN 1252
            |         :|....||::....:::...:.....| ..||:   ::.|..:.|.|        
 Frog   833 SSPHIRRRTPSTRECPSRQSMPNSSSSLLGSLFGTKR-GKPPS---SSSSQGHLASG-------- 885

  Fly  1253 FVQQSQAAYMLQQQQMLQQQAQMQAQAQAQAQAQAQAQAQAQAQAQAQP 1301
               .||...::..|:  ....::....:.|.|||..||.......|..|
 Frog   886 ---ASQHPTLISHQR--HSTGELVGPPEGQTQAQVHAQHSQYYHMQQNP 929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:279680 121/187 (65%)
PH_IQSEC 981..1108 CDD:270128 81/129 (63%)
iqsec1NP_001107304.1 Sec7 403..591 CDD:279680 121/187 (65%)
PH_IQSEC 628..758 CDD:270128 81/129 (63%)
Hep_59 745..>799 CDD:284467 26/72 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 260 1.000 Domainoid score I1930
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 545 1.000 Inparanoid score I1134
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D360558at33208
OrthoFinder 1 1.000 - - FOG0002052
OrthoInspector 1 1.000 - - otm48656
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X920
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.060

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