DRSC/TRiP Functional Genomics Resources

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Protein Alignment siz and cyth3a

DIOPT Version :9

Sequence 1:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_001342037.2 Gene:cyth3a / 100002190 ZFINID:ZDB-GENE-120612-1 Length:396 Species:Danio rerio


Alignment Length:358 Identity:108/358 - (30%)
Similarity:175/358 - (48%) Gaps:71/358 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   764 TIRKRQYRVGLNLFNKKPEKGITYLIRRGFLENTPQGVARFLITRKGLSRQMIGEYLGNLQNQFN 828
            |.|.:|..||...||..|:|||.:|:....|::||:.:|:||...:||::.:||:|||. ::.||
Zfish    61 TQRSKQIAVGRKKFNMDPKKGIQFLLENDLLQHTPEDIAQFLYKGEGLNKTVIGDYLGE-RDDFN 124

  Fly   829 MAVLSCFAMELDLSGRQVDVALRKFQAYFRMPGEAQKIERLMEIFSQRYCECNADIVGRLRSSDT 893
            :.||..|....:.:...:..|||:|...||:|||||||:|:||.::.|||:||.   |..:|:||
Zfish   125 IRVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQKIDRMMEAYAARYCQCNP---GVFQSTDT 186

  Fly   894 IFVLAFAIIMLNTDLHTPNL--KPERRMRVEDFIKNLRGIDDCHDIDKDMLMGIYDRVKSDEFK- 955
            .:||:|::|||||.||.||:  ||.    ||.||...|||::..|:.:::|..:|:.:|::.|| 
Zfish   187 CYVLSFSVIMLNTSLHNPNVRDKPS----VERFISMNRGINEGGDLPEELLRNLYESIKNEPFKI 247

  Fly   956 ---PGSDHVTQVMKVQATIVGKKPNLALPHRRLVCYCRLYEIPD-----VNKKERPGVHQREVFL 1012
               .|:|                    |.|        .:..||     :....|....:|..|:
Zfish   248 PEDDGND--------------------LTH--------TFFNPDREGWLLKLGGRVKTWKRRWFI 284

  Fly  1013 FNDLLVITKIFSKKKTSVTYTFRNSFPLCGTVVTLLDMPNYPFCIQL-------------SQKVD 1064
            ..|..:....::..|..     |...||....:..::.|..|.|.:|             ..:.|
Zfish   285 LTDNCLYYFEYTTDKEP-----RGIIPLENLSIREVEEPRKPNCFELYNPSHKGQVIKACKTEAD 344

  Fly  1065 GK------ILITFNARNEHDRCKFAEDLKESIS 1091
            ||      ::...:|....::.::.:.:|.|||
Zfish   345 GKVVEGNHVVYRISAPTPEEKEEWIKSIKASIS 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sizNP_730594.1 Sec7 766..954 CDD:279680 79/189 (42%)
PH_IQSEC 981..1108 CDD:270128 23/135 (17%)
cyth3aXP_001342037.2 Sec7 63..245 CDD:279680 79/189 (42%)
PH_GRP1-like 260..379 CDD:269954 22/123 (18%)
PH 264..377 CDD:278594 18/117 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582792
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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