Protein Alignment Pdss2 and COQ1

DIOPT Version :10

• Sequence 1: NP_649277.1
• Gene: Pdss2 / 40323
• FlyBaseID: FBgn0037044
• Length: 448
• Species: Drosophila melanogaster
• Sequence 2: NP_009557.1
• Gene: COQ1 / 852288
• SGDID: S000000207
• Length: 473
• Species: Saccharomyces cerevisiae
• Alignment Length: 512
• Identity: 131/512 - (25%)
• Similarity: 218/512 - (42%)
• Gaps: 140/512 - (27%)

  Fly    27 QVAKAAPALQTFTSQ--RWTSTTTTSGKHASPQVTTPPPRHDWNRAVSEAERIVGYPTSFLSLRW 89
            |.:.||..::..:|:  |:.|:...:...||..||   |:..||..:|
Yeast     3 QRSGAAHHIKLISSRRCRFKSSFAVALNAASKLVT---PKILWNNPIS----------------- 47

  Fly    90 LLSDEIANVALHLRKLVGSAHPLMK--TAKHLLYNGKNTMQAWGLIVLLVSKAAGHAP------- 145
            |:|.|:..:|.::..|:||.||::.  |:.:....||....   |:|||:|:|....|
Yeast    48 LVSKEMNTLAKNIVALIGSGHPVLNKVTSYYFETEGKKVRP---LLVLLLSRALSEIPMTERNHL 109

  Fly   146 -------------------------------------------------SVPDVEQDKSAGVLHS 161
                                                             .:|:...||..|:|..
Yeast   110 KIDKSDVPEDPIYSKPSQNQLFQRPASSISPLHILHGIKPLNPLTKGPEPLPEETFDKQRGILPK 174

  Fly   162 QRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDDMSFGNKIGLLTGDYLLGHSSAELANL 226
            ||.|||:.|||..:.|:|:.|:: .|.|:.|:   ...:.:|.||:.:|.||:|||.::..::.|
Yeast   175 QRRLAEIVEMIHTASLLHDDVID-HSDTRRGR---PSGNAAFTNKMAVLAGDFLLGRATVSISRL 235

  Fly   227 RNQEVVELISSAVRDFSESEFI--------GERDEQNN-----PLP-----YKPGTFQRPSLSVG 273
            .|.|||||:|:::.:..|.||:        .:.|...|     |:|     .|...|:.||...|
Yeast   236 HNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVPSKKLEVKEHDFRVPSRQQG 300

  Fly   274 VDFNEHDVMTPMPIAQVLGNPEEEWECRNILNAGSLLGKSCQASLKLAGQSEELQRHAYRFGKHL 338
            :..: ||        |::....|.:..:..|...:|:.|||:.:..|:|.|..:....|.||::|
Yeast   301 LQLS-HD--------QIIETAFEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFGRNL 356

  Fly   339 ALAWQACLDAEPFQCPQLPL------DVTFSLVSAPVLFHLEHDPGM-------YSQLEAGKQSV 390
            .:.:|...|...|......|      |:...:.:|||||..:.||.:       :|:....::::
Yeast   357 GICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKEDPSLGPLISRNFSERGDVEKTI 421

  Fly   391 DNIDYDKIHKAILAGPALAKTKELQRKHTAAALAVLQ-HFPATDARQALE---NIIL 443
            |::   ::|..|      ||||.|..::...||..|: ..|.:|||.|||   |.||
Yeast   422 DSV---RLHNGI------AKTKILAEEYRDKALQNLRDSLPESDARSALEFLTNSIL 469

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pdss2	NP_649277.1	Isoprenoid_Biosyn_C1	86..441	CDD:469660	114/447 (26%)
COQ1	NP_009557.1	Isoprenoid_Biosyn_C1	48..471	CDD:469660	117/447 (26%)