Protein Alignment Pdss2 and GGPS6

DIOPT Version :10

• Sequence 1: NP_649277.1
• Gene: Pdss2 / 40323
• FlyBaseID: FBgn0037044
• Length: 448
• Species: Drosophila melanogaster
• Sequence 2: NP_175376.1
• Gene: GGPS6 / 841377
• AraportID: AT1G49530
• Length: 336
• Species: Arabidopsis thaliana
• Alignment Length: 284
• Identity: 56/284 - (19%)
• Similarity: 93/284 - (32%)
• Gaps: 91/284 - (32%)

  Fly    33 PALQTFTSQRWTSTTTTSGKHASPQVTTPPPRHDWNRAVSEAERIVGYPTSFLSLRWLLSDEIAN 97
            |.|:...:.|:  |....||...|.:           .:...|.:.|..::      .:....|.
plant    63 PVLEVHKAMRY--TLLPGGKRVRPML-----------CLVACELVGGQEST------AMPAACAV 108

  Fly    98 VALHLRKLVGSAHPLM--------KTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAPSVPDVEQDK 154
            ..:|...|:....|.|        |...|.::..|.:        :|.|.|. .:.:|.......
plant   109 EMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTS--------ILASNAL-RSLAVKQTLAST 164

  Fly   155 SAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDD-MSFGNK------------ 206
            |.||. |:|.|..|.||.|        .|..:... |||..|...: |||.|:
plant   165 SLGVT-SERVLRAVQEMAR--------AVGTEGLV-AGQAADLAGERMSFKNEDDELRYLELMHV 219

  Fly   207 ------------IGLLTGDYLLGHSSAELANLRNQE-----VVELISSAVRDFSESEFIGE---R 251
                        :|.:.|    |.|..|:..|::..     :.:::...:.:...||.:|:   :
plant   220 HKTAVLVEAAAVVGAIMG----GGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEELGKTAGK 280

  Fly   252 DEQNNPLPYKPGTFQRPSLSVGVD 275
            |.....|.|       |.: :|||
plant   281 DLITGKLTY-------PKV-MGVD 296

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pdss2	NP_649277.1	Isoprenoid_Biosyn_C1	86..441	CDD:469660	47/231 (20%)
GGPS6	NP_175376.1	IspA	28..336	CDD:439912	56/284 (20%)