Protein Alignment Pdss2 and GGR

DIOPT Version :10

• Sequence 1: NP_649277.1
• Gene: Pdss2 / 40323
• FlyBaseID: FBgn0037044
• Length: 448
• Species: Drosophila melanogaster
• Sequence 2: NP_195558.1
• Gene: GGR / 830002
• AraportID: AT4G38460
• Length: 326
• Species: Arabidopsis thaliana
• Alignment Length: 284
• Identity: 54/284 - (19%)
• Similarity: 92/284 - (32%)
• Gaps: 95/284 - (33%)

  Fly    19 IPVELQPLQV---AKAAPA-----LQTFTSQRWTSTTTTSGKHASPQVTTPPPRHDWNRAVSEA- 74
            :|::|.|..:   :.:||.     |:|:    ||:..|...:.....:   |.:|.  ..:.||
plant    23 LPMKLSPAAIRSSSSSAPGSLNFDLRTY----WTTLITEINQKLDEAI---PVKHP--AGIYEAM 78

  Fly    75 --------------------------ERIVGYPTSFLSLRWLLSDEIANVALHLRKLVGSAHPLM 113
                                      :|:..:||:           .|...:|...|:....|.|
plant    79 RYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTA-----------CALEMVHAASLIHDDLPCM 132

  Fly   114 --------KTAKHLLY-NGKNTMQAWGLIVLLVSKAAGHAPSVPDVEQDKSAGVLHSQRALAEVT 169
                    |.:.|.:| :|...:....|..|.......|.|  ||:.  ..|.:|   |.:.|:.
plant   133 DDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTP--PDLV--PRATIL---RLITEIA 190

  Fly   170 EMIRISHLVHNSVVNLQSSTQAGQDVDT---------YDDMSFG--NKIGLLTGDYLLGHSSAEL 223
            ..:.            .:...|||.||.         ..:..||  .:...:.|..|.|.:..||
plant   191 RTVG------------STGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDEL 243

  Fly   224 ANLRNQ-EVVELISSAVRDFSESE 246
            .:||.. ..|.::...|.|.:|.:
plant   244 QSLRRYGRAVGMLYQVVDDITEDK 267

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pdss2	NP_649277.1	Isoprenoid_Biosyn_C1	86..441	CDD:469660	37/182 (20%)
GGR	NP_195558.1	IspA	46..>263	CDD:439912	47/255 (18%)