Protein Alignment Pdss2 and AT3G20160

DIOPT Version :10

• Sequence 1: NP_649277.1
• Gene: Pdss2 / 40323
• FlyBaseID: FBgn0037044
• Length: 448
• Species: Drosophila melanogaster
• Sequence 2: NP_188651.1
• Gene: AT3G20160 / 821560
• AraportID: AT3G20160
• Length: 344
• Species: Arabidopsis thaliana
• Alignment Length: 241
• Identity: 50/241 - (20%)
• Similarity: 86/241 - (35%)
• Gaps: 69/241 - (28%)

  Fly    22 ELQPLQVAKAAPALQTFTSQRWTSTTTTSGKHASPQVTTPPPRHDWNRAVSEAERIVGYPTSFLS 86
            |..||:    .|.|:...:.|:  |..:.||...|.:           .::..|.:.|..::.:|
plant    67 EAVPLR----EPELKIREAMRY--TLLSDGKRVRPML-----------CLAACELVGGQESTAMS 114

  Fly    87 LRWLLSDEIANVALHLRKLVGSAHPLM--------KTAKHLLYNGKN--TMQAWGLIVLLVSKAA 141
            ....:.      .||...|:....|.|        |...|::: |::  .:.:..||.|.|.|..
plant   115 AACAIE------MLHASSLILDDLPCMDNDSLRRGKPTNHIVF-GESIAILASQALIALAVQKTT 172

  Fly   142 GHAPSVPDVEQDKSAGVLHSQRALAEVTEMIR-ISHLVHNSVVNLQSSTQAGQDVD-TYDDMSFG 204
              :.:..||.         .:|.|..|.||:: :..||            |||..| ..:.|.|.
plant   173 --SSTFADVP---------PERILKTVQEMVKAVEGLV------------AGQQADLAGEGMRFD 214

  Fly   205 NKIGLLTGDYLLGHSSAELANLR----------NQEVVELISSAVR 240
            :..||...:::..|.:|.|....          :.|.:|.:.|..|
plant   215 SDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYAR 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pdss2	NP_649277.1	Isoprenoid_Biosyn_C1	86..441	CDD:469660	38/177 (21%)
AT3G20160	NP_188651.1	IspA	50..344	CDD:439912	50/241 (21%)