DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdss2 and Pdss1

DIOPT Version :10

Sequence 1:NP_649277.1 Gene:Pdss2 / 40323 FlyBaseID:FBgn0037044 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_062374.2 Gene:Pdss1 / 56075 MGIID:1889278 Length:409 Species:Mus musculus


Alignment Length:448 Identity:93/448 - (20%)
Similarity:174/448 - (38%) Gaps:101/448 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GLRIMQQMRRRIPVELQPLQVAKAAPALQTF------TSQRWTSTTTTSG-KHASPQVTTPPPRH 65
            |.|.....|.:||.......:..|:|.:.:.      |....:...|.|| |::.|         
Mouse    34 GTRAASDTRAQIPYFSLMKILMSASPTMHSISQFHQRTPAMCSCRQTQSGEKYSDP--------- 89

  Fly    66 DWNRAVSEAERIVGYPTSFLSLRWLLSDEIANVALHLRKLVGSAHPLMKTAKHLLYNGKNTMQAW 130
                          :...:..|:.|..|        :||.:..:...:|......::||.  :|:
Mouse    90 --------------FKLGWRDLKGLYED--------IRKELHISTRELKDMSEYYFDGKG--KAF 130

  Fly   131 -GLIVLLVSKAAGHAPSVPDVEQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQD 194
             .:||:|:::|.       ::..:.:..:..|||::|.|.|||..:.|||:.|::..||.:....
Mouse   131 RPIIVVLMARAC-------NIHHNNAREMQASQRSIALVAEMIHTATLVHDDVIDDASSRRGKHT 188

  Fly   195 VDTYDDMSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEF--IGERDEQNNP 257
            |:..    :|.|..:|.||.:|..:|..||.:.|..||.:::..:.|....||  :|.::.:|..
Mouse   189 VNKI----WGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENER 249

  Fly   258 LP-YKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWECRNILNAGSLLGKSCQASLKLA 321
            .. |...||::                                      ..||:..||:|...|.
Mouse   250 FAHYLEKTFKK--------------------------------------TASLIANSCKAVSVLG 276

  Fly   322 GQSEELQRHAYRFGKHLALAWQACLDAEPF-QCPQ-----LPLDVTFSLVSAPVLFHLEHDPGMY 380
            .....:...||::||::.:|:|...|...| .|..     ...|:...:.:.||||..:..|.|.
Mouse   277 CPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFACQQFPEMN 341

  Fly   381 SQLEAGKQSVDNIDYDKIHKAILAGPALAKTKELQRKHTAAALAVLQHFPATDARQAL 438
            :.: ..:.|:.. |.|:..:.:|....:.:|..|.:::...|:..::....:..|.||
Mouse   342 AMI-MRRFSLPG-DVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIRKLRPSTERDAL 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdss2NP_649277.1 Isoprenoid_Biosyn_C1 86..441 CDD:469660 80/363 (22%)
Pdss1NP_062374.2 PLN02890 57..409 CDD:178478 88/425 (21%)

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