Protein Alignment Pdss2 and Ggps1

DIOPT Version :9

• Sequence 1: NP_001287138.1
• Gene: Pdss2 / 40323
• FlyBaseID: FBgn0037044
• Length: 448
• Species: Drosophila melanogaster
• Sequence 2: NP_001007627.1
• Gene: Ggps1 / 291211
• RGDID: 1359680
• Length: 300
• Species: Rattus norvegicus
• Alignment Length: 323
• Identity: 62/323 - (19%)
• Similarity: 104/323 - (32%)
• Gaps: 111/323 - (34%)

  Fly   112 LMKTAKHLL-YNGKNTMQAWGLIVLLVSKAAGHAPSVPDVEQDKSAGVLHSQRALAEVTEMIRIS 175
            |::..|:|| ..||.       :...:|:|..|...||   :||       .:.:.|||||:
  Rat    12 LLEPYKYLLQLPGKQ-------VRTKLSQAFNHWLKVP---EDK-------LQIIIEVTEML--- 56

  Fly   176 HLVHNSVVNLQSSTQAGQDVDTYDDMSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVR 240
               ||:.:.:             ||:...:|   |...:.:.||            :..:.|.:.
  Rat    57 ---HNASLLI-------------DDIEDSSK---LRRGFPVAHS------------IYGVPSVIN 90

  Fly   241 DFSESEFIGERDEQNNPLPYKPGTFQRPSLSV----GVDFNEHDVMTPMPIAQVLGNPEEEWECR 301
            ..:...|:|.........|.....|.|..|.:    |:|....|..| .|       .|||::..
  Rat    91 SANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDTYT-CP-------TEEEYKAM 147

  Fly   302 NILNAGSLLGKSCQASLKLAGQSEELQRHAYRFGKHLALAWQACLDAEPFQCPQLPLDVTFSLVS 366
            .:...|.|.|.:.......:...|:|:                            ||..|..|
  Rat   148 VLQKTGGLFGLAVGLMQLFSDYKEDLK----------------------------PLLDTLGL-- 182

  Fly   367 APVLFHLEHDPGMYSQLEAGKQSVD----------NIDYDKIHKAILAGPALAKTKELQRKHT 419
               .|.:..|   |:.|.:.:.|.:          ...:..|| ||.:.|...:.:.:.|:.|
  Rat   183 ---FFQIRDD---YANLHSKEYSENKSFCEDLTEGKFSFPTIH-AIWSRPESTQVQNILRQRT 238

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pdss2	NP_001287138.1	Isoprenoid_Biosyn_C1	86..441	CDD:294142	62/323 (19%)
Ggps1	NP_001007627.1	polyprenyl_synt	9..251	CDD:395277	62/323 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0142
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810