DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdss2 and FDPS

DIOPT Version :9

Sequence 1:NP_001287138.1 Gene:Pdss2 / 40323 FlyBaseID:FBgn0037044 Length:448 Species:Drosophila melanogaster
Sequence 2:XP_024309834.1 Gene:FDPS / 2224 HGNCID:3631 Length:454 Species:Homo sapiens


Alignment Length:161 Identity:35/161 - (21%)
Similarity:53/161 - (32%) Gaps:54/161 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 GHSSAELANLRNQEVVELISSAVRDFSESEFIGERDEQNNP------------LPYKP--GTFQR 267
            |..::::.....|:.|:..|..||..:|       ||..:|            |.|..  |.:.|
Human    69 GDQNSDVYAQEKQDFVQHFSQIVRVLTE-------DEMGHPEIGDAIARLKEVLEYNAIGGKYNR 126

  Fly   268 PSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWE---CRNILNAGSLLGKS-CQASLKLAGQSEELQ 328
             .|:|.|.|.|    ...|..|...:.:..|.   |..:|.|..|:... ..:||...||     
Human   127 -GLTVVVAFRE----LVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQ----- 181

  Fly   329 RHAYRFGKHLALAWQACLDAEPFQCPQLPLD 359
                       :.|        :|.|.:.||
Human   182 -----------ICW--------YQKPGVGLD 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdss2NP_001287138.1 Isoprenoid_Biosyn_C1 86..441 CDD:294142 35/161 (22%)
FDPSXP_024309834.1 polyprenyl_synt 108..408 CDD:306784 25/115 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0142
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.