DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12983 and Casc1

DIOPT Version :9

Sequence 1:NP_001137992.1 Gene:CG12983 / 40319 FlyBaseID:FBgn0037040 Length:1104 Species:Drosophila melanogaster
Sequence 2:NP_796196.3 Gene:Casc1 / 320662 MGIID:2444480 Length:730 Species:Mus musculus


Alignment Length:1147 Identity:177/1147 - (15%)
Similarity:338/1147 - (29%) Gaps:503/1147 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KRKNQDAVSIKPAVELLSEEEWMARRNIYMQRLADLKTSVAFIDDAVEEYKELQKQKLRN-DKWN 66
            :::.|:.:.|    :.:..|:|.......::|.:.....:|.::....| .|.||:::|. .:|.
Mouse    42 EKEEQERLEI----QRIEREKWSLLEKKDLERRSQELEELALLEGCFPE-AEKQKREIRALAQWK 101

  Fly    67 SYLACDGLPNPSRPAEIRKFIFQLNFMEQESCANEISWVLSVDECSVLSQAPDRCDRTRKIMEKS 131
            .|..|||.|:|....|:..||   :..|:|.                 :||      ..::||||
Mouse   102 HYTECDGSPDPWVAQEMNTFI---SLWEEEK-----------------NQA------FEQVMEKS 140

  Fly   132 RPNVGQLYDETVQRILATIERVQRVLRNDDELVHLPTFQVRELDKIPNELYGEIESFFDKLTYRV 196
            :            .:|:.||:|:.:      |:..||:::.....:.::  |.|....:.|:.::
Mouse   141 K------------LVLSLIEKVKLI------LLETPTYELDHRTVLQHQ--GSILRLQELLSLKI 185

  Fly   197 VSSPDALMM-----------NKDSILSCYCYKCSNFDLEIW-GLQDVP----IRFNYLKLPVMCS 245
            ..:.:.|:.           |.:.|:     |..|..|.:| .|:..|    :||:..:      
Mouse   186 NVATELLLRQASNLADLDTGNMEKII-----KDENVTLYVWANLKKNPRHRSVRFSETQ------ 239

  Fly   246 DLNCVGVTIQLPLSVLCDNLTLRCVRTFFDPLSHLAKSFELVIDSSVIPNCGLVDIADSVMSEWM 310
                  :..::|..:...|:.||.:.|.:|   |:...|.:.:........|    |:.|..|..
Mouse   240 ------IGFEIPRILATSNVALRLLHTRYD---HITPLFPIAVTEQNQNPVG----AEQVNVEES 291

  Fly   311 TQMDIQEDLVVKMETEMRAYNEAIAFIAQAEAKEKRKSQKKKIAIPKPPKMPQELPAGMFPDPRK 375
            |:..:.|:   |:.||.:|.||                       .:.||..||           
Mouse   292 TEKAMTEE---KLFTEEKAANE-----------------------DEQPKAEQE----------- 319

  Fly   376 IFLEHEKRDCTDFFNRYFHPGNINLLPSEVNLRRFIILGGIVSLVFVGKAKHASYEKFNITLHED 440
                                ..:||:..|                       ..||....|    
Mouse   320 --------------------RELNLVQEE-----------------------NKYEAIENT---- 337

  Fly   441 GRVLRKSLNILDESSTEECSMQPSKLDIGTDIMRDTEVGEASKIPLHLEPDELPYYFLTFKVPNH 505
              ||:::      |.:|....|.::|::...::  :|...|:::.|.....|||.....:||.  
Mouse   338 --VLQRT------SDSEGEDSQTTQLELEMKLL--SEAVLAAQLCLVENVVELPEASQAYKVD-- 390

  Fly   506 LCLWGEPIVCQFFESEIEETPSKAKAEELDKKLDKKKKPVRKSSRKENESVLRVPTTSGSVSMSE 570
                    :|.|                                           :|.|.|...:
Mouse   391 --------LCHF-------------------------------------------STLGGVYHLD 404

  Fly   571 --EKPPQSNRPTYHQPARENSVNIYRPSALTIVRQSGMETEQIQYKKTFKNSNLVKEPISKRNLS 633
              |.|||. :|.             :...|..:.|.|::                          
Mouse   405 VLELPPQC-KPV-------------KGWVLVEILQEGLQ-------------------------- 429

  Fly   634 LLQDQCLPRIISSLRFPRDFQDDKMEAQAMKKIPVTQLYKRQLTESVGSTQIEKFSFNYEDQSNP 698
                          ||                     :|....||                :.:|
Mouse   430 --------------RF---------------------IYPPDTTE----------------EPDP 443

  Fly   699 ERLYPKFPVTEDLRVETDRTDSSKEEGTMLGLLRTLEGIKDKYLDAPKRIVEQTTHAVRMSRKAY 763
            :..:|...||                                 |:..|.::              
Mouse   444 DVTFPPIEVT---------------------------------LEIHKSVI-------------- 461

  Fly   764 SDPIPTTRSRRQSYFGRRSVRQLDSSIMSIARPVDIEYELSETSDTGEQMIKSRKDSRLPSTILS 828
                         :|.|..|.:.|:                                        
Mouse   462 -------------FFERPRVVRWDN---------------------------------------- 473

  Fly   829 QSAEPRNAAHWTTEFILESSFNKESKVVIVKTDRLGHFGFAYRRYAHFPFRHWELEKNEQNHDEI 893
                  ....|.::.|....:|:|.:::....|.||........:.:.|::.||:.....|  ::
Mouse   474 ------EGKFWRSDGISSVYYNREDRLLTFSMDTLGPVTLIQDAHVNMPYQSWEMSPCGMN--KV 530

  Fly   894 ILTLDTYHVRVVFFISKD------------GIRCHAIDIPKEYVHRPFKYIDIDKPISDFVELRK 946
            :|.:.|..:.:..:|.::            |:..|.    |.....|..:|             .
Mouse   531 LLIVKTVFMELQIYIKENLCMLASVKLRGKGLEFHL----KGKWMAPIPFI-------------L 578

  Fly   947 RLQDMNLNVFAELDACFYIDQGYFSQKHLAAELHIYDAIAVHGKLMKFSRSQWNRLAKDRDLVLC 1011
            .|::..||:|..:.:.||:   ..:.|....||..|..:|:......|..|:||        ::|
Mouse   579 ALKEAGLNIFPAVYSHFYV---VINNKVPQVELKAYRQMALLSSAFSFGWSKWN--------MVC 632

  Fly  1012 LQNTRDIHDGSEVTVRVTPEVSTFVD-----VSELCSDDTKVIKL-----NYKSTWRNMGT--YS 1064
                    :.:.|.:||..::|...:     :.....|..:::|:     .:....|. ||  :|
Mouse   633 --------NSTRVVIRVREQLSEETEHHTWSLLMFSGDRAQMLKMQEENDKFSEALRE-GTEFHS 688

  Fly  1065 DLHQLINSMYPQATDMRNRDANQMYY--IRQLLQEIRPLSFS 1104
            .|:.::..........|.|.:|..:.  :..:|..||.||:|
Mouse   689 TLYHMMKDFASPVAMERVRHSNCQFIDSVCYMLLSIRVLSYS 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12983NP_001137992.1 Casc1 253..515 CDD:289161 44/261 (17%)
Casc1 839..1054 CDD:289161 41/236 (17%)
Casc1NP_796196.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Casc1_N 39..229 CDD:292549 47/242 (19%)
Casc1 244..469 CDD:289161 70/529 (13%)
Casc1 483..651 CDD:289161 38/205 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833364
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D526857at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR20929
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3892
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
55.000

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