DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12983 and Dnai7

DIOPT Version :10

Sequence 1:NP_001137992.1 Gene:CG12983 / 40319 FlyBaseID:FBgn0037040 Length:1104 Species:Drosophila melanogaster
Sequence 2:XP_038963394.1 Gene:Dnai7 / 297720 RGDID:1311213 Length:767 Species:Rattus norvegicus


Alignment Length:870 Identity:166/870 - (19%)
Similarity:314/870 - (36%) Gaps:214/870 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 KEKRKSQKKKIAIPKPPKMPQELPAGMFPDPRKIFLEHEKRDCTDFFNRYFHPGNINLLPSEVN- 406
            |:|:...||||...:..::.||.......:..:..|::||.:......:.......|||..:|| 
  Rat     4 KQKKAPTKKKITKAERLRLLQEEEEKRLKEEEEARLKYEKEEQERLEKQRIEREKWNLLEKKVNK 68

  Fly   407 ----LRRFIILG---GIVSLVFV--GKAKHASYEKFNITLHEDGRVLRKSLNILDESSTEECSMQ 462
                |..:.:|.   .:.|..|.  |.:.|..::.           |.:....|:|.:..||...
  Rat    69 YECQLGCYPLLHWGCSVPSPAFTACGASPHMCFQD-----------LERRSEELEELALLECCFP 122

  Fly   463 PSKLDIGTDIMRDTEVGEASKIPLHLEPDELPYYFLTFKVPNHLCLWGEPIVCQFFESEIEETPS 527
            .::       .:..|:...::...:.|.|..|...:..::...:.||.|. ..:.||..:|:  |
  Rat   123 EAE-------KQKREMRVLAQWKHYTECDGSPDPRIAQEMNTFISLWEEE-KNETFEQVMEK--S 177

  Fly   528 KAKAEELDK-KLDKKKKPVRKSSRKENESVLRVPTTSGSVSMSEEKPPQSNRPTYHQPARENSVN 591
            |.....::| ||...:.|   |...:..:||:.   .||:...:|             .....||
  Rat   178 KLVLSLIEKLKLILLETP---SCDLDKSTVLQY---QGSILRLQE-------------LLSLKVN 223

  Fly   592 IYRPSALTIVRQSG----METEQIQYKKTFKN--------SNLVKEPISKRNLSLLQDQC---LP 641
            :   :...::||:.    ::|..::  |..|:        :||.|.| ..|.:...|.|.   :|
  Rat   224 V---ATELLLRQASNLADLDTGNME--KIIKDENVTLYVWANLKKNP-RYRTVKFSQTQVGFEIP 282

  Fly   642 RIIS----SLRFPRDFQDDKMEAQAMKKIPVTQLYKRQLTESV-GSTQIEKFSFNYEDQSNPERL 701
            ||::    :||......|.           :|.|:...:||.. ||...|    |::::...|:.
  Rat   283 RILATSNVALRLLHTHYDH-----------ITPLFSTVVTEEKHGSIVAE----NFKEEERTEKA 332

  Fly   702 YPKFPV--------TEDLRVETDRTDSS--KEEGTMLGLLRTLEGIKDKYLDAPKRIVEQTTHAV 756
            .|:..|        .|.|:.|.:|..||  :||   :....|::.:..|..| |:....|||. .
  Rat   333 VPEENVFTEEAADEAEQLKAEEERELSSIPEEE---VKFDPTVDTVTQKISD-PEEEESQTTQ-F 392

  Fly   757 RMSRKAYSDPIPTTRSRRQSYFGRRSVRQLDSSIMSIARPVDIE-YE------------------ 802
            .:.||..|:.:              |..||......:..|..:| ||                  
  Rat   393 ELERKLLSETV--------------SAAQLSLIENVLEMPETLEPYEVNMCHFAPLGGVYHLEIL 443

  Fly   803 -------------LSETSDTG--------EQMIKSRKDSRLP----STILSQSA----EPR---- 834
                         |:|....|        |...:...:|..|    :..:.:||    :|:    
  Rat   444 ELPPQSKPVKGWVLAEIRQEGLQKFTYPPENTEEPDPESAFPPIEVTLEIHESAIFFEDPQVVRW 508

  Fly   835 --NAAHWTTEFILESSFNKESKVVIVKTDRLGHFGFAYRRYAHFPFRHWELEKNEQNHDEIILTL 897
              ....|.::.:....:|:|::::....|.:|........:.:.|::.|||.....|  :.:|.:
  Rat   509 DAEGKFWRSDGVTCVYYNRENRLLTFSIDTMGPVTLIQDAHVNMPYQSWELSPLGMN--KALLMV 571

  Fly   898 DTYHVRVVFFISKDGIRCHAIDIPKEYVHRPFKYIDIDKPISDFVELRKRLQDMNLNVFAELDAC 962
            .|..:.:...|.:  ..|....:..:...|..:.|........|:   ..|::..||:|..:.:.
  Rat   572 TTVFIELQIHIKE--THCMLAAVKLKGKSRELRVIGKWMTPIPFI---LALKEAGLNIFPAVYSH 631

  Fly   963 FYIDQGYFSQKHLAAELHIYDAIAVHGKLMKFSRSQWNRLAKDRDLVLCLQNTRDIHDGSEVTVR 1027
            ||:   ..:.|....||..|..:|:......|..|:||        ::|        :.:.|..|
  Rat   632 FYV---VVNNKVPQMELKAYRQMALLSSAFSFGWSKWN--------MVC--------NSTRVVFR 677

  Fly  1028 VTPEVSTFVDVSE-----LCSDDTKVIKLNYKSTW--RNMGTYSDLHQLINSMY-----PQATD- 1079
            |...:|...:.:.     ...|..:::|:..:|..  ..:...|:.|..:..|.     |:||: 
  Rat   678 VREHISEEEEQNTWALLMFSGDRAQMLKMQEESDQFSETLREGSEFHSTLYHMMKDFASPEATEK 742

  Fly  1080 MRNRDANQMYYIRQLLQEIRPLSFS 1104
            :|:.:...:..:..:|..:|.||:|
  Rat   743 VRHSNCQFIDSVCYMLLSVRVLSYS 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12983NP_001137992.1 Casc1_N 17..152 CDD:464947
Casc1_C 838..1056 CDD:432508 39/222 (18%)
Dnai7XP_038963394.1 Casc1_N 37..266 CDD:464947 52/274 (19%)
Blue background indicates that the domain is not in the aligned region.

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