DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10588 and Nrdc

DIOPT Version :9

Sequence 1:NP_001287135.1 Gene:CG10588 / 40316 FlyBaseID:FBgn0037037 Length:1058 Species:Drosophila melanogaster
Sequence 2:XP_006238561.1 Gene:Nrdc / 25499 RGDID:3210 Length:1229 Species:Rattus norvegicus


Alignment Length:1163 Identity:340/1163 - (29%)
Similarity:562/1163 - (48%) Gaps:191/1163 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 EPD--KSDGDSKLYRALTLSNGLRAMLISD----------------------------------- 66
            :|:  ||..|.|.||.:.|.|||:|:||||                                   
  Rat    97 DPEIIKSPSDPKQYRYIKLQNGLQALLISDLSNVEGKTGNATDEEEEEEEEEEEGEEEEEEEEDD 161

  Fly    67 ------------------SYIDEPSI--------------------------------------- 74
                              .:.||...                                       
  Rat   162 DDDDDEDSGAEIQDDDEEGFDDEEEFDDDEHDDDDLDNEENELEELEERVEARKKTTEKQQSQNL 226

  Fly    75 ------------HRASRESLNSS----TENFNG----------------------------KLAA 95
                        .::|...::|:    |.|..|                            .|:|
  Rat   227 FLLWSKLTDRLWFKSSYSKMSSTLLVETRNLYGVVGAESRSAPVEHLAGWQVEEQQGETDTVLSA 291

  Fly    96 CAVLVGVGSFSEPQQYQGLAHFVEHMIFMGSEKFPVENEFDSFVTKSGGFSNAHTENEETCFYFE 160
            .|:.||||||::|....|||||:|||:||||.|:|.||.||:|:.|.||..||.|:.|.|.|.|:
  Rat   292 AALCVGVGSFADPDDLPGLAHFLEHMVFMGSLKYPDENGFDAFLKKHGGSDNASTDCERTVFQFD 356

  Fly   161 LDQTHLDRGMDLFMNLMKAPLMLPDAMSRERSAVQSEFEQTHMRDEVRRDQILASLASEGYPHGT 225
            :.:.:....:|.:......|||:.||:.||..||.||::.....|..|::.:..|||..|:|.|.
  Rat   357 VQRKYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQLARPSDANRKEMLFGSLARPGHPMGK 421

  Fly   226 FSWGNYKTLKEGVDDSSL--HKELHKFYRDHYGSNRMVVALQAQLSLDELEELLVRHCADIPTSQ 288
            |.|||.:|||.....:::  |..|.:|:..:|.::.|.:.:|::.:||.||:.:....:.||.:.
  Rat   422 FFWGNAETLKHEPKKNNIDTHARLREFWMRYYSAHYMTLVVQSKETLDTLEKWVTEIFSQIPNNG 486

  Fly   289 QNSIDVSQLNYQKAFRDQFYKDVFLVQPVEDVCKLELTWVLPPMKNFYRSKPDMFISQLIGYEGV 353
            ....:.|.|.  ..|....:..::.|.|:..:..|.:||.|||.:..||.||..:||.|:|:||.
  Rat   487 LPKPNFSHLT--DPFDTPAFNKLYRVVPIRKIHALTITWALPPQQQHYRVKPLHYISWLVGHEGK 549

  Fly   354 GSLCAYLRHHLWCISVVAGVAESSFDSNSIYSLFNICIYLSDDGFDHIDEVLEATFAWVKLIINS 418
            ||:.:|||...|.:::..|..|:.|:.||.||:|:|.|.|:|:|::|..||....|.::|::...
  Rat   550 GSILSYLRKKCWALALFGGNGETGFEQNSTYSVFSISITLTDEGYEHFYEVAHTVFQYLKMLQKL 614

  Fly   419 DQLQDSYKESQQIENNNFRFQIEPPPIDHVQSIVESFNYLPSKDVLTGPQLYFQYEESAI-ELLR 482
            ...:..::|.|:||:|.|.:|.:..|:::|:::.|:....|.:|.|||.||.|:|:...| |.|.
  Rat   615 GPEKRVFEEIQKIEDNEFHYQEQTDPVEYVENMCENMQLYPRQDFLTGDQLLFEYKPEVIAEALN 679

  Fly   483 QHM-NKFNFNIMISSYIPYEKNEYDQREPWFGTQFKTISMPPKWQTMWEQSATI-KELHYPQPNP 545
            |.: .|.|..::..:    .:...|.:|.|||||:....:...|..:|:.:..: .:||.|..|.
  Rat   680 QLVPQKANLVLLSGA----NEGRCDLKEKWFGTQYSIEDIENSWTELWKSNFDLNSDLHLPAENK 740

  Fly   546 FVTTDFKIHWVESGKPHVSRSPKALIRNDLCELWFRQDNIFKLPDGYINLYFITPLVRESVKQYM 610
            ::.|||.:...:..:   :..|..::......||:::||.||:|..||..:.|:||:::|....:
  Rat   741 YIATDFTLKAFDCPE---TEYPAKIVNTPQGCLWYKKDNKFKIPKAYIRFHLISPLIQKSAANVV 802

  Fly   611 LGVLFTYLVEFRMAEQLYPALEAGLTYGLYIGDKGLVMRVSGYNEKLPLLVEIILNMMQTIELDI 675
            |..:|..::...:||..|.|..|.|.|.|..|:.||::||.|:|.|||||.::|::.:.......
  Rat   803 LFDIFVNILTHNLAEPAYEADVAQLEYKLVAGEHGLIIRVKGFNHKLPLLFQLIIDYLTEFSSTP 867

  Fly   676 GQVNAFKDLKKRQIYNALINGKSLNLDLRLSILENKRFSMISKYES-VDDITMDDIKSFKENFHK 739
            .......:..|:..:|.||..::|..|:||.|||..|:|||.||.: :|.::::.:.:|.::|..
  Rat   868 AVFTMITEQLKKTYFNILIKPETLAKDVRLLILEYSRWSMIDKYRALMDGLSLESLLNFVKDFKS 932

  Fly   740 KMYVKGLIQGNFTEDQATDLMQKVLDTYKSEKLDNLSALDNHLLQIPLGSYYLRAKTLNEDDSNT 804
            :::|:||:|||.|..::.|.::.|:|......|:....:...::::|.|.:..:.:.||:.|:|:
  Rat   933 QLFVEGLVQGNVTSTESMDFLRYVVDKLNFVPLEREMPVQFQVVELPSGHHLCKVRALNKGDANS 997

  Fly   805 IITNYYQIGPSDLKMECIMDLVELIVEEPFFNQLRTQEQLGYSLGIHQRIGYGVLAFLITINTQE 869
            .:|.|||.|...|:...:|:|:.:.:|||.|:.|||::.|||.:....|...|:|.|.:|:.||.
  Rat   998 EVTVYYQSGTRSLREYTLMELLVMHMEEPCFDFLRTKQTLGYHVYPTCRNTSGILGFSVTVGTQA 1062

  Fly   870 TKHRADYVEQRIEAFRSRMAELVSQMSDTEFKNIRETLINGKKLGDTSLDEEVLRNWSEIVTKEY 934
            ||:.::.|:::||.|.|...|.:..:::..|......||..|:..||.|.|||.|||:|:||::|
  Rat  1063 TKYNSETVDKKIEEFLSSFEEKIENLTEDAFNTQVTALIKLKECEDTHLGEEVDRNWNEVVTQQY 1127

  Fly   935 FFNRIETQIQMLSHLTKEDVLNFLNDNDKNNLRKLSVQVVGNHNQTSNSTAQASRSGSLSDLLDD 999
            .|:|:..:|:.|...:|.|::::...:.....:.|||.|||                        
  Rat  1128 LFDRLAHEIEALKSFSKSDLVSWFKAHRGPGSKMLSVHVVG------------------------ 1168

  Fly  1000 VQDNMANETDSAKPMTDKIRLE-----------FLGESDDPSSIKDIYAFKKDLYVFP 1046
             ......|.|.|....|....|           .|.||..|  |.||.||...|.:||
  Rat  1169 -YGKYELEEDGAPVCEDPNSREGMQLIYLPPSPLLAESTTP--ITDIRAFTATLSLFP 1223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10588NP_001287135.1 Ptr 27..980 CDD:223956 323/1084 (30%)
Peptidase_M16 85..214 CDD:279066 56/160 (35%)
Peptidase_M16_C 244..419 CDD:282978 57/174 (33%)
Peptidase_M16_M 436..720 CDD:292805 89/286 (31%)
Peptidase_M16_C 724..907 CDD:282978 53/182 (29%)
NrdcXP_006238561.1 Ptr 290..1168 CDD:223956 297/886 (34%)
Peptidase_M16 290..416 CDD:279066 55/125 (44%)
Peptidase_M16_C 441..627 CDD:282978 59/187 (32%)
Peptidase_M16_M 632..913 CDD:292805 90/287 (31%)
Peptidase_M16_C 918..1100 CDD:282978 53/181 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353808
Domainoid 1 1.000 173 1.000 Domainoid score I3595
eggNOG 1 0.900 - - E1_COG1025
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 621 1.000 Inparanoid score I842
OMA 1 1.010 - - QHG63000
OrthoDB 1 1.010 - - D1008844at2759
OrthoFinder 1 1.000 - - FOG0000548
OrthoInspector 1 1.000 - - otm45881
orthoMCL 1 0.900 - - OOG6_100422
Panther 1 1.100 - - O PTHR43690
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4190
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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