DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10588 and Nrd1

DIOPT Version :9

Sequence 1:NP_001287135.1 Gene:CG10588 / 40316 FlyBaseID:FBgn0037037 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_001334098.1 Gene:Nrd1 / 230598 MGIID:1201386 Length:1229 Species:Mus musculus


Alignment Length:1163 Identity:345/1163 - (29%)
Similarity:566/1163 - (48%) Gaps:191/1163 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 EPD--KSDGDSKLYRALTLSNGLRAMLISD----------------------------------- 66
            :|:  ||..|.|.||.:.|.|||:|:||||                                   
Mouse    97 DPEIIKSPSDPKQYRYIKLQNGLQALLISDLSNVEGKTGNATDEEEEEEEEEEEEDDDDDDDDDD 161

  Fly    67 ---------------SYIDEPSI------------------------------------------ 74
                           .:.||...                                          
Mouse   162 DDEDSGAEIQDDDEEGFDDEEEFDDDDDDEHDDDDLENEENELEELEERVEARKKTTEKQQSQNL 226

  Fly    75 ------------HRASRESLNSS----TENFNG----------------------------KLAA 95
                        .::|...::|:    |.|..|                            .|:|
Mouse   227 FLLWSKLTDRLWFKSSYSKMSSTLLVETRNLYGVVGAESRSAPVEHLAGWQVEEQQGETDTVLSA 291

  Fly    96 CAVLVGVGSFSEPQQYQGLAHFVEHMIFMGSEKFPVENEFDSFVTKSGGFSNAHTENEETCFYFE 160
            .|:.||||||::|....|||||:|||:||||.|:|.||.||:|:.|.||..||.|:.|.|.|.|:
Mouse   292 AALCVGVGSFADPDDLPGLAHFLEHMVFMGSLKYPDENGFDAFLKKHGGSDNASTDCERTVFQFD 356

  Fly   161 LDQTHLDRGMDLFMNLMKAPLMLPDAMSRERSAVQSEFEQTHMRDEVRRDQILASLASEGYPHGT 225
            :.:.:....:|.:......|||:.||:.||..||.||::.....|..|::.:..|||..|:|.|.
Mouse   357 VQRKYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQLARPSDANRKEMLFGSLARPGHPMGK 421

  Fly   226 FSWGNYKTLKEGVDDSSL--HKELHKFYRDHYGSNRMVVALQAQLSLDELEELLVRHCADIPTSQ 288
            |.|||.:|||.....:::  |..|.:|:..:|.::.|.:.:|::.:||.||:.:....:.||.:.
Mouse   422 FFWGNAETLKHEPKKNNIDTHARLREFWMRYYSAHYMTLVVQSKETLDTLEKWVTEIFSQIPNNG 486

  Fly   289 QNSIDVSQLNYQKAFRDQFYKDVFLVQPVEDVCKLELTWVLPPMKNFYRSKPDMFISQLIGYEGV 353
            ....:.|.|.  ..|....:..::.|.|:..:..|.:||.|||.:..||.||..:||.|:|:||.
Mouse   487 LPKPNFSHLT--DPFDTPAFNKLYRVVPIRKIHALTITWALPPQQQHYRVKPLHYISWLVGHEGK 549

  Fly   354 GSLCAYLRHHLWCISVVAGVAESSFDSNSIYSLFNICIYLSDDGFDHIDEVLEATFAWVKLIINS 418
            ||:.:|||...|.:::..|..|:.|:.||.||:|:|.|.|:|:|::|..||....|.::|::...
Mouse   550 GSILSYLRKKCWALALFGGNGETGFEQNSTYSVFSISITLTDEGYEHFYEVAHTVFQYLKMLQKL 614

  Fly   419 DQLQDSYKESQQIENNNFRFQIEPPPIDHVQSIVESFNYLPSKDVLTGPQLYFQYEESAI-ELLR 482
            ...:..::|.|:||:|.|.:|.:..|:::|:::.|:....|.:|.|||.||.|:|:...| |.|.
Mouse   615 GPEKRVFEEIQKIEDNEFHYQEQTDPVEYVENMCENMQLYPRQDFLTGDQLLFEYKPEVIAEALN 679

  Fly   483 QHM-NKFNFNIMISSYIPYEKNEYDQREPWFGTQFKTISMPPKWQTMWEQSATIK-ELHYPQPNP 545
            |.: .|.|..::..:    .:...|.:|.|||||:....:...|..:|:.:..:. :||.|..|.
Mouse   680 QLVPQKANLVLLSGA----NEGRCDLKEKWFGTQYSIEDIENSWTELWKSNFDLNPDLHLPAENK 740

  Fly   546 FVTTDFKIHWVESGKPHVSRSPKALIRNDLCELWFRQDNIFKLPDGYINLYFITPLVRESVKQYM 610
            ::.|||.:...:.  |......|.:.....| ||:::||.||:|..||..:.|:||:::|....:
Mouse   741 YIATDFTLKAFDC--PETEYPAKIVNTAQGC-LWYKKDNKFKIPKAYIRFHLISPLIQKSAANVV 802

  Fly   611 LGVLFTYLVEFRMAEQLYPALEAGLTYGLYIGDKGLVMRVSGYNEKLPLLVEIILNMMQTIELDI 675
            |..:|..::...:||..|.|..|.|.|.|..|:.||::||.|:|.|||||.::|::.:.......
Mouse   803 LFDIFVNILTHNLAEPAYEADVAQLEYKLVAGEHGLIIRVKGFNHKLPLLFQLIIDYLTEFSSTP 867

  Fly   676 GQVNAFKDLKKRQIYNALINGKSLNLDLRLSILENKRFSMISKYES-VDDITMDDIKSFKENFHK 739
            .......:..|:..:|.||..::|..|:||.|||..|:|||.||:: :|.:::|.:.:|.::|..
Mouse   868 AVFTMITEQLKKTYFNILIKPETLAKDVRLLILEYSRWSMIDKYQALMDGLSLDSLLNFVKDFKS 932

  Fly   740 KMYVKGLIQGNFTEDQATDLMQKVLDTYKSEKLDNLSALDNHLLQIPLGSYYLRAKTLNEDDSNT 804
            :::|:||:|||.|..::.|.::.|:|......|:....:...::::|.|.:..:.:.||:.|:|:
Mouse   933 QLFVEGLVQGNVTSTESMDFLKYVVDKLNFAPLEREMPVQFQVVELPSGHHLCKVRALNKGDANS 997

  Fly   805 IITNYYQIGPSDLKMECIMDLVELIVEEPFFNQLRTQEQLGYSLGIHQRIGYGVLAFLITINTQE 869
            .:|.|||.|...|:...:|:|:.:.:|||.|:.|||::.|||.:....|...|:|.|.:|:.||.
Mouse   998 EVTVYYQSGTRSLREYTLMELLVMHMEEPCFDFLRTKQTLGYHVYPTCRNTSGILGFSVTVGTQA 1062

  Fly   870 TKHRADYVEQRIEAFRSRMAELVSQMSDTEFKNIRETLINGKKLGDTSLDEEVLRNWSEIVTKEY 934
            ||:.::.|:::||.|.|...|.:..:::..|......||..|:..||.|.|||.|||:|:||::|
Mouse  1063 TKYNSETVDKKIEEFLSSFEEKIENLTEDAFNTQVTALIKLKECEDTHLGEEVDRNWNEVVTQQY 1127

  Fly   935 FFNRIETQIQMLSHLTKEDVLNFLNDNDKNNLRKLSVQVVG-----------NHNQTSNSTAQAS 988
            .|:|:..:|:.|...:|.|::::...:.....:.|||.|||           ...:.||     |
Mouse  1128 LFDRLAHEIEALKSFSKSDLVSWFKAHRGPGSKMLSVHVVGYGKYELEEDGAPFGEDSN-----S 1187

  Fly   989 RSGSLSDLLDDVQDNMANETDSAKPMTDKIRLEFLGESDDPSSIKDIYAFKKDLYVFP 1046
            |.|.....|            ...|:        |.||..|  |.||.||...|.:||
Mouse  1188 REGMQLTYL------------PPSPV--------LAESTTP--ITDIRAFTATLSLFP 1223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10588NP_001287135.1 Ptr 27..980 CDD:223956 326/1095 (30%)
Peptidase_M16 85..214 CDD:279066 56/160 (35%)
Peptidase_M16_C 244..419 CDD:282978 57/174 (33%)
Peptidase_M16_M 436..720 CDD:292805 91/286 (32%)
Peptidase_M16_C 724..907 CDD:282978 54/182 (30%)
Nrd1NP_001334098.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850111
Domainoid 1 1.000 176 1.000 Domainoid score I3598
eggNOG 1 0.900 - - E1_COG1025
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 620 1.000 Inparanoid score I880
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63000
OrthoDB 1 1.010 - - D1008844at2759
OrthoFinder 1 1.000 - - FOG0000548
OrthoInspector 1 1.000 - - otm43798
orthoMCL 1 0.900 - - OOG6_100422
Panther 1 1.100 - - O PTHR43690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4190
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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