DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sems and gzma

DIOPT Version :10

Sequence 1:NP_649270.1 Gene:Sems / 40315 FlyBaseID:FBgn0037036 Length:275 Species:Drosophila melanogaster
Sequence 2:XP_021324736.1 Gene:gzma / 795070 ZFINID:ZDB-GENE-091204-156 Length:257 Species:Danio rerio


Alignment Length:214 Identity:66/214 - (30%)
Similarity:101/214 - (47%) Gaps:10/214 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 VIGGRVTTNAKLGGYLVAMRYFNNFICGGTLIHELIVLTAAHCFEDRAEKEAWSVDGGISRLS-E 107
            ::||:....|.  .::|:::...|..|||.|||:..|||||||.||...    ||...|..|| .
Zfish    28 IVGGKDVKKAL--SWMVSIQVNQNHKCGGILIHKEWVLTAAHCKEDSYS----SVTVLIGSLSLS 86

  Fly   108 KGIRR-QVKRFIKSAQFKMVTMNMDVAVVLLNRPMVGKNIGTLSLCSTALTPGQTMDVSGWGMTN 171
            ||.:| .:..:.....|...|...|:.::.|::.:..|.. .:......:.||....|.|||.|:
Zfish    87 KGSQRIAIHNYEIPETFNKKTKKDDIMLIRLSKKVKAKPY-KIPKKEKDVQPGTKCVVRGWGTTD 150

  Fly   172 PDDEGPGHMLRTVSVPVIEKRICREAYRESVSISDSMFCA-SVLGKKDACTYDSGGPLVYEKQVC 235
            ...:.....|:.:.|.|:::..|...|..:..|:..|.|| :....:..|..||||||..||.:.
Zfish   151 YKGKQASDKLQMLEVLVVDRVQCNRYYNRNPVITKDMLCAGNTQQHRGTCLGDSGGPLECEKNLV 215

  Fly   236 GIVSFGIGCASRRYPGVYT 254
            |::|...||...:.|.|||
Zfish   216 GVLSGSHGCGDPKKPTVYT 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SemsNP_649270.1 Tryp_SPc 43..263 CDD:214473 66/214 (31%)
gzmaXP_021324736.1 Tryp_SPc 28..247 CDD:238113 66/214 (31%)

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