DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sems and prss1

DIOPT Version :9

Sequence 1:NP_649270.1 Gene:Sems / 40315 FlyBaseID:FBgn0037036 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_571783.2 Gene:prss1 / 65223 ZFINID:ZDB-GENE-010131-7 Length:247 Species:Danio rerio


Alignment Length:217 Identity:73/217 - (33%)
Similarity:117/217 - (53%) Gaps:10/217 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RVIGGRVTTNAKLG-GYLVAMRYFNNFICGGTLIHELIVLTAAHCFEDRAEKEAWSVDGGISRLS 106
            :::||...|  |.| .|.|::....:| |||:||..|.|::||||::.|.:......:..::..:
Zfish    24 KIVGGYECT--KNGVPYQVSLNSGYHF-CGGSLISNLWVVSAAHCYKSRVQVRLGEHNIDVTEGT 85

  Fly   107 EKGIRRQVKRFIKSAQFKMVTMNMDVAVV-LLNRPMVGKNIGTLSLCSTALTPGQTMDVSGWGMT 170
            |:.|..:  :.|:...:...|::.||.:: |.:...:...:.|:||.|:..:.|.:..:||||..
Zfish    86 EQFINSE--KVIRHPSYNSNTLDNDVMLIKLSSSAQINSYVKTVSLPSSCASSGTSCLISGWGNM 148

  Fly   171 NPDDEGPGHMLRTVSVPVIEKRICREAYRESVSISDSMFCASVL-GKKDACTYDSGGPLVYEKQV 234
            :.........|..::.|::....||.||  ...||.:||||..: |.||:|..|||||:|...|:
Zfish   149 SASGSNYPSRLMCLNAPILSDSTCRNAY--PGQISSNMFCAGFMEGGKDSCQGDSGGPVVCNNQL 211

  Fly   235 CGIVSFGIGCASRRYPGVYTDV 256
            .||||:|.|||.|..||||..|
Zfish   212 QGIVSWGYGCAQRNKPGVYAKV 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SemsNP_649270.1 Tryp_SPc 43..263 CDD:214473 73/217 (34%)
Tryp_SPc 44..265 CDD:238113 73/216 (34%)
prss1NP_571783.2 Tryp_SPc 24..240 CDD:214473 73/217 (34%)
Tryp_SPc 25..243 CDD:238113 73/216 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBP0
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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