DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sems and Gm5771

DIOPT Version :9

Sequence 1:NP_649270.1 Gene:Sems / 40315 FlyBaseID:FBgn0037036 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_001034086.1 Gene:Gm5771 / 436523 MGIID:3646222 Length:245 Species:Mus musculus


Alignment Length:276 Identity:83/276 - (30%)
Similarity:127/276 - (46%) Gaps:58/276 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKRLLFLFLLAGILINNHALQHNETIDLKKLAKIVLPPAYQTRVIGGRVTTNAKLGGYLVAMRYF 65
            |..||||.|:..                     .|..|....:::|| .|.......|.|::...
Mouse     1 MSALLFLALVGA---------------------AVAFPVDDDKIVGG-YTCRENSVPYQVSLNSG 43

  Fly    66 NNFICGGTLIHELIVLTAAHCFEDRAEKEAWSVDGGISRLSEKGIR--------RQVKRFIKSAQ 122
            .:| |||:||::..|::||||::.|.:          .||.|..|:        ....:.||...
Mouse    44 YHF-CGGSLINDQWVVSAAHCYKTRIQ----------VRLGEHNIKVLEGNEQFVNAAKIIKHPN 97

  Fly   123 FKMVTMNMDVAVVLLNRPM-VGKNIGTLSLCSTALTPGQTMDVSGWGMT------NPDDEGPGHM 180
            |...|:|.|:.::.|:.|: :...:.|::|.|:....|....:||||.|      .||      :
Mouse    98 FNRKTLNNDIMLIKLSSPVTLNARVATVALPSSCAPAGTQCLISGWGNTLSFGVSEPD------L 156

  Fly   181 LRTVSVPVIEKRICREAYRESVSISDSMFCASVL-GKKDACTYDSGGPLVYEKQVCGIVSFGIGC 244
            |:.:..|::.:..|..:|  ...|:.:|.||..| |.||:|..|||||:|...::.||||:|.||
Mouse   157 LQCLDAPLLPQADCEASY--PGKITGNMVCAGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGC 219

  Fly   245 ASRRYPGVYTDV-HYV 259
            |....|||||.| :||
Mouse   220 ALADNPGVYTKVCNYV 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SemsNP_649270.1 Tryp_SPc 43..263 CDD:214473 75/234 (32%)
Tryp_SPc 44..265 CDD:238113 75/233 (32%)
Gm5771NP_001034086.1 Tryp_SPc 22..238 CDD:214473 75/234 (32%)
Tryp_SPc 23..241 CDD:238113 75/233 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBP0
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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