DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sems and CG8299

DIOPT Version :10

Sequence 1:NP_649270.1 Gene:Sems / 40315 FlyBaseID:FBgn0037036 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_611066.1 Gene:CG8299 / 36751 FlyBaseID:FBgn0034052 Length:260 Species:Drosophila melanogaster


Alignment Length:267 Identity:89/267 - (33%)
Similarity:128/267 - (47%) Gaps:31/267 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKRLLFLFLLA--GILINNHALQHNETIDLKKLAKIVLPPAYQTRVIGGRVTTNAKLGGYLVAMR 63
            |...|.|||||  |::|            |...|.|      .|.::||.....|.. .|.|::|
  Fly     1 MSLRLGLFLLAALGVVI------------LTDSASI------STHIVGGDQADIADF-PYQVSVR 46

  Fly    64 ---YFNNFICGGTLIHELIVLTAAHCFEDRAEKEAWSVDG--GISRLSEKGIRRQVKRFIKSAQF 123
               |....||||::....:|:|||||.:.|.......|.|  .|:.|.|:|::  |.:.|..|.:
  Fly    47 LETYMLLHICGGSIYAPRVVITAAHCIKGRYASYIRIVAGQNSIADLEEQGVK--VSKLIPHAGY 109

  Fly   124 KMVTMNMDVAVVLLNRPM-VGKNIGTLSLCSTALTPGQTMDVSGWGMTNPDDEGPGHMLRTVSVP 187
            ...|...|:.:::...|: ....:..:::...|...|....|||||....|||....|||.|.:.
  Fly   110 NKKTYVNDIGLIITREPLEYSALVQPIAVALEAPPSGAQAVVSGWGKRAEDDEALPAMLRAVELQ 174

  Fly   188 VIEKRICREAY-RESVSISDSMFCASVL-GKKDACTYDSGGPLVYEKQVCGIVSFGIGCASRRYP 250
            :|||..|...| .:..:::|.|.||..| |.||.|..||||||..:..:.|:||:|:||....:|
  Fly   175 IIEKSTCGAQYLTKDYTVTDEMLCAGYLEGGKDTCNGDSGGPLAVDGVLVGVVSWGVGCGREGFP 239

  Fly   251 GVYTDVH 257
            ||||.|:
  Fly   240 GVYTSVN 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SemsNP_649270.1 Tryp_SPc 43..263 CDD:214473 76/223 (34%)
CG8299NP_611066.1 Tryp_SPc 27..252 CDD:214473 76/223 (34%)

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