DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sems and Ser8

DIOPT Version :10

Sequence 1:NP_649270.1 Gene:Sems / 40315 FlyBaseID:FBgn0037036 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster


Alignment Length:279 Identity:78/279 - (27%)
Similarity:126/279 - (45%) Gaps:33/279 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLFLFLLAGILINNHALQHNETIDLKKLAKIVLPPAYQTRVIGGRVTTNAKLGG---------YL 59
            ||....||.:.:.|.|           :..|.|.|  ||..:|||:     :||         :.
  Fly     3 LLIATFLALLALTNGA-----------VIPIGLEP--QTSSLGGRI-----VGGTASSIEDRPWQ 49

  Fly    60 VAMRYFNNFICGGTLIHELIVLTAAHCFEDRAEKEAWSVDGGISRLSEKGIRRQVKRFIKSAQFK 124
            |:::...:..|||::|...|::|||||.:.........:..|.::.:..|:..:|........:.
  Fly    50 VSLQRSGSHFCGGSIISNNIIVTAAHCLDTPTTVSNLRIRAGSNKRTYGGVLVEVAAIKAHEAYN 114

  Fly   125 MVTMNMDVAVVLLNRPMV-GKNIGTLSLCSTALTPGQTMDVSGWGMTNPDDEGPGH-MLRTVSVP 187
            ..:...|:.||.|...:. |..|..:::.|.....|....:||||.|:.|  ||.. .|..|...
  Fly   115 SNSKINDIGVVRLKTKLTFGSTIKAITMASATPAHGSAASISGWGKTSTD--GPSSATLLFVDTR 177

  Fly   188 VIEKRIC-REAYRESVSISDSMFCASVLGKKDACTYDSGGPLVYEKQVCGIVSFGIGCASRRYPG 251
            ::.:..| ...|.....|..:|.||:.. .||||..|||||||...|:.|:||:|..||...|||
  Fly   178 IVGRSQCGSSTYGYGSFIKATMICAAAT-NKDACQGDSGGPLVSGGQLVGVVSWGRDCAVANYPG 241

  Fly   252 VYTDVHYVKPFIVKGIKAL 270
            ||.::..::.::::..|.:
  Fly   242 VYANIAELRDWVLQAQKTV 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SemsNP_649270.1 Tryp_SPc 43..263 CDD:214473 66/231 (29%)
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 63/225 (28%)

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