DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sems and Ser8

DIOPT Version :9

Sequence 1:NP_649270.1 Gene:Sems / 40315 FlyBaseID:FBgn0037036 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster


Alignment Length:279 Identity:78/279 - (27%)
Similarity:126/279 - (45%) Gaps:33/279 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLFLFLLAGILINNHALQHNETIDLKKLAKIVLPPAYQTRVIGGRVTTNAKLGG---------YL 59
            ||....||.:.:.|.|           :..|.|.|  ||..:|||:     :||         :.
  Fly     3 LLIATFLALLALTNGA-----------VIPIGLEP--QTSSLGGRI-----VGGTASSIEDRPWQ 49

  Fly    60 VAMRYFNNFICGGTLIHELIVLTAAHCFEDRAEKEAWSVDGGISRLSEKGIRRQVKRFIKSAQFK 124
            |:::...:..|||::|...|::|||||.:.........:..|.::.:..|:..:|........:.
  Fly    50 VSLQRSGSHFCGGSIISNNIIVTAAHCLDTPTTVSNLRIRAGSNKRTYGGVLVEVAAIKAHEAYN 114

  Fly   125 MVTMNMDVAVVLLNRPMV-GKNIGTLSLCSTALTPGQTMDVSGWGMTNPDDEGPGH-MLRTVSVP 187
            ..:...|:.||.|...:. |..|..:::.|.....|....:||||.|:.|  ||.. .|..|...
  Fly   115 SNSKINDIGVVRLKTKLTFGSTIKAITMASATPAHGSAASISGWGKTSTD--GPSSATLLFVDTR 177

  Fly   188 VIEKRIC-REAYRESVSISDSMFCASVLGKKDACTYDSGGPLVYEKQVCGIVSFGIGCASRRYPG 251
            ::.:..| ...|.....|..:|.||:.. .||||..|||||||...|:.|:||:|..||...|||
  Fly   178 IVGRSQCGSSTYGYGSFIKATMICAAAT-NKDACQGDSGGPLVSGGQLVGVVSWGRDCAVANYPG 241

  Fly   252 VYTDVHYVKPFIVKGIKAL 270
            ||.::..::.::::..|.:
  Fly   242 VYANIAELRDWVLQAQKTV 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SemsNP_649270.1 Tryp_SPc 43..263 CDD:214473 66/231 (29%)
Tryp_SPc 44..265 CDD:238113 66/232 (28%)
Ser8NP_610874.1 Tryp_SPc 34..253 CDD:214473 64/226 (28%)
Tryp_SPc 35..253 CDD:238113 63/225 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBP0
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24276
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.