DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sems and Gzmk

DIOPT Version :10

Sequence 1:NP_649270.1 Gene:Sems / 40315 FlyBaseID:FBgn0037036 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_032222.1 Gene:Gzmk / 14945 MGIID:1298232 Length:263 Species:Mus musculus


Alignment Length:287 Identity:84/287 - (29%)
Similarity:133/287 - (46%) Gaps:56/287 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLAGILINNHALQHNETIDLKKLAKIVLPPAYQTRVIGGR-VTTNAKLGGYLVAMRYFNNFICGG 72
            |:||:.:::.                    .:.|.:|||| |..:::  .::.:::|.:..||||
Mouse    11 LVAGVYMSSE--------------------CFHTEIIGGREVQPHSR--PFMASIQYRSKHICGG 53

  Fly    73 TLIHELIVLTAAHCFEDRAEKEAWSVDG-------GISRLSEKGIRRQ---VKRFIKSAQFKMVT 127
            .|||...|||||||:       :|...|       |...||:....:|   :|:||..::.:..:
Mouse    54 VLIHPQWVLTAAHCY-------SWFPRGHSPTVVLGAHSLSKNEPMKQTFEIKKFIPFSRLQSGS 111

  Fly   128 MNMDVAVVLLNRPM-VGKNIGTLSLCS-TALTPGQTMDVSGWGMTNPDDEGPGHMLRTVSVPVIE 190
            .:.|:.::.|.... :.||:..|.|.| ..|..|....|:|||.|.||.......||.|:|.:|.
Mouse   112 ASHDIMLIKLRTAAELNKNVQLLHLGSKNYLRDGTKCQVTGWGTTKPDLLTASDTLREVTVTIIS 176

  Fly   191 KRIC--REAYRESVSISDSMFCA-SVLGKKDACTYDSGGPLVYEKQVCGIVSFGIGCASRRYPGV 252
            ::.|  :..|.....|:..|.|| ...|:||:|..||||||:.:.....:||.|..|...:.||:
Mouse   177 RKRCNSQSYYNHKPVITKDMICAGDARGQKDSCKGDSGGPLICKGIFHALVSQGYKCGIAKKPGI 241

  Fly   253 YTDVHYVKPFIVK----GIKALLSRSR 275
            ||       .:.|    .||:.|:.||
Mouse   242 YT-------LLTKKYQTWIKSKLAPSR 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SemsNP_649270.1 Tryp_SPc 43..263 CDD:214473 74/235 (31%)
GzmkNP_032222.1 Tryp_SPc 26..256 CDD:238113 77/245 (31%)

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