DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sems and LOC1277089

DIOPT Version :10

Sequence 1:NP_649270.1 Gene:Sems / 40315 FlyBaseID:FBgn0037036 Length:275 Species:Drosophila melanogaster
Sequence 2:XP_316522.5 Gene:LOC1277089 / 1277089 VectorBaseID:AGAMI1_006180 Length:281 Species:Anopheles gambiae


Alignment Length:239 Identity:64/239 - (26%)
Similarity:102/239 - (42%) Gaps:23/239 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RVIGGRVTTNAKLGGYLVAMRYFNNFI---CGGTLIHELIVLTAAHCFEDRAE----KEAW-SVD 99
            ||.||..|.   ||.|..|:.....:|   |.||:::...|||||.|..:...    ...| .|.
Mosquito    28 RVTGGTATL---LGQYPSAVIIETPYIPQNCMGTVVNRQHVLTAASCVMNPTTFVMINPFWLRVI 89

  Fly   100 GGISRLSEKGIRRQVKRFIKS---AQFKMVTMNMDVAVVLLNRPMVG-KNIGTLSLCSTALTPGQ 160
            .|...:.....||:|::.|:|   ..:..:|...::||:.::.|... .|....:|.:..:....
Mosquito    90 AGDINIVPVSTRREVRQVIRSYVHPNYNRLTDGNNLAVLRVDVPFPEFHNTIEPALLNARILADN 154

  Fly   161 TMDV-SGWGMTNPDDEG---PGHMLRTVSVPVIEKRICREAYRESVSISDSMFCASVLGKKD--A 219
            |..| :|||.|......   |...:  |:.|::....|..|...:..:..:|.||..|.:..  .
Mosquito   155 TQCVFAGWGATQNQVTAVVRPNQFV--VTQPILATVSCNAANVHNNRVQQTMICAGALAQSQNAV 217

  Fly   220 CTYDSGGPLVYEKQVCGIVSFGIGCASRRYPGVYTDVHYVKPFI 263
            |..:.||.|....::.|:::||:||.....||||.||.....:|
Mosquito   218 CRGNMGGGLYCNGRLTGVLAFGMGCGVANQPGVYMDVRQYTQWI 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SemsNP_649270.1 Tryp_SPc 43..263 CDD:214473 63/237 (27%)
LOC1277089XP_316522.5 None

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