DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sems and LOC1269074

DIOPT Version :10

Sequence 1:NP_649270.1 Gene:Sems / 40315 FlyBaseID:FBgn0037036 Length:275 Species:Drosophila melanogaster
Sequence 2:XP_061514456.1 Gene:LOC1269074 / 1269074 VectorBaseID:AGAMI1_009123 Length:278 Species:Anopheles gambiae


Alignment Length:233 Identity:60/233 - (25%)
Similarity:98/233 - (42%) Gaps:24/233 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RVIGGRVTTNAKLGGYLVAMRYFNNFICGGTLIHELIVLTAAHC-FEDRAEKEAWSVDGGISRLS 106
            |::.|:..:..|. .|.:::|....|.||.|:|.....|||||| ::..::....::.||.:..|
Mosquito    36 RIVNGKAVSIVKY-KYALSLRVNGVFDCGATIITNSHSLTAAHCVYKYPSDPSRVTLYGGSTSTS 99

  Fly   107 EKGIRRQVKRFIKSAQFKM----VTMNMDVAVVLL------NRPMVGKNIGTLSLCSTALTPGQT 161
            ..||...|........:..    ...:.||||:.:      .||    |:..|:|.:..|..|..
Mosquito   100 SGGIEVPVVSIALHPNYNRKAFPAASDCDVAVLTVPVNSFSGRP----NMAPLALQTNELPVGTE 160

  Fly   162 MDVSGWGMTNPDDEGPGHMLRTVSVPVIEKRICREAYRE--------SVSISDSMFCASVLGKKD 218
            ..|.|||.|..:.....:.||..::.::.:..|...:.|        ..||:.:|.||......|
Mosquito   161 CFVIGWGRTGNNQPASVNQLRYANMNIVSQSTCATMWAEYRKLCGTCKQSITSNMICAKYNNGVD 225

  Fly   219 ACTYDSGGPLVYEKQVCGIVSFGIGCASRRYPGVYTDV 256
            .|..||||.||....:.|:|||.....:..:|..:..:
Mosquito   226 TCGGDSGGALVCGSGLAGVVSFSHPNCTSAWPAGFAKI 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SemsNP_649270.1 Tryp_SPc 43..263 CDD:214473 60/233 (26%)
LOC1269074XP_061514456.1 None

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