DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fng and c1galt1a

DIOPT Version :10

Sequence 1:NP_524191.1 Gene:fng / 40314 FlyBaseID:FBgn0011591 Length:412 Species:Drosophila melanogaster
Sequence 2:XP_005170092.1 Gene:c1galt1a / 555344 ZFINID:ZDB-GENE-060503-810 Length:316 Species:Danio rerio


Alignment Length:213 Identity:41/213 - (19%)
Similarity:73/213 - (34%) Gaps:72/213 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 WFCHFDDDNYVNVPRLVKLLDEYSPSVDWYLG---KPSISSPLEIHLDSKNTTTNKKITFWFATG 292
            ||...|||.:|.:..|...|.::|.....|.|   :|.::.                   .:.:|
Zfish   139 WFLKADDDTFVVIENLRHSLSKHSSEDPLYFGRRFRPFVAQ-------------------GYMSG 184

  Fly   293 GAGFCLSRALTLKMLPIAGGGKFISIGDKIRFPDDVTMGFIIEHLLKVPLTVVDN--------FH 349
            |||:.||:....:.:.....|......:.    :||.||..:|   |:.:.:.|:        ||
Zfish   185 GAGYVLSKEALRRFVKGFADGLCTHTTEL----EDVGMGQCME---KMKVEMGDSRDVFGRQVFH 242

  Fly   350 SHLEPMEFIRQ-----------DTFQD----------QVSFSYAHMKNQWNVIKVDGFDMKTDPK 393
            .:......:||           |.:..          .:||.|           ::..:|.|  .
Zfish   243 PYPPGNYLVRQLRRQRPWYLIYDHYTPVEGPGCCSDFAISFHY-----------INAVEMHT--L 294

  Fly   394 RFYSLHCQLFPY-FSFCP 410
            .:|:.|.:.:.| :.|.|
Zfish   295 EYYTYHLRPYGYKYRFNP 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fngNP_524191.1 Fringe 145..394 CDD:367085 36/194 (19%)
c1galt1aXP_005170092.1 Galactosyl_T <139..>229 CDD:473923 25/115 (22%)

Return to query results.
Submit another query.