DRSC/TRiP Functional Genomics Resources

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Protein Alignment fng and rfng

DIOPT Version :9

Sequence 1:NP_524191.1 Gene:fng / 40314 FlyBaseID:FBgn0011591 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_001001830.2 Gene:rfng / 414848 ZFINID:ZDB-GENE-030131-5418 Length:362 Species:Danio rerio


Alignment Length:395 Identity:156/395 - (39%)
Similarity:215/395 - (54%) Gaps:56/395 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 MLAVAVVYMTLLLYQSAYGYPGIQVPHSQVDALASEAVTTHRDQLLQDYVQSSTPTQPGAGA-PA 84
            :|::|...:.:||      .|.:|.|..|.|.                       .||...| ||
Zfish    14 LLSLAFCALLVLL------IPSLQPPQRQADL-----------------------PQPRPHAKPA 49

  Fly    85 ASPTTVII---RKDIRSFNFSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQPPVTE 146
            ..|....:   .:|.|..:|:.....|               |.:.:.||:..      .....:
Zfish    50 KHPLKNSLYRPNEDTRGGSFTQTTPPE---------------NLQKMDDLNSH------YRDFLD 93

  Fly   147 LDDIFISVKTTKNYHDTRLALIIKTWFQLARDQTWFFTDTDDHYYQEKTKGHLINTKCSQGHFRK 211
            |.||||:||||:.||.:||.|:.:||...|::||:.|||.:|...:.|...::|||.||..|.|:
Zfish    94 LRDIFIAVKTTRKYHKSRLQLLSQTWVSRAKEQTFIFTDGEDKELRLKAGLNIINTNCSAAHTRQ 158

  Fly   212 ALCCKMSAELDVFLESGKKWFCHFDDDNYVNVPRLVKLLDEYSPSVDWYLGKPSISSPLEIHLDS 276
            |||||||.|.|.|:||.||||||.||||||.:|.|::||..||.:.|.|||:||:..|:|. .:.
Zfish   159 ALCCKMSVEYDKFIESQKKWFCHVDDDNYVILPSLLELLSSYSHTQDVYLGRPSLDHPIEA-AER 222

  Fly   277 KNTTTNKKITFWFATGGAGFCLSRALTLKMLPIAGGGKFISIGDKIRFPDDVTMGFIIEHLLKVP 341
            ..:..:..:.|||||||||||:||.|.|||.|.|..|.||:..:|||.|||.|:|:|||.||:||
Zfish   223 VKSDGSVSVKFWFATGGAGFCISRGLALKMSPWASLGNFITTAEKIRLPDDCTIGYIIEALLEVP 287

  Fly   342 LTVVDNFHSHLEPMEFIRQDTFQDQVSFSYAHMKNQWNVIKVDG-FDMKTDPKRFYSLHCQLFPY 405
            ||....||||||.::.:..:....||:.||...:|:.||:.|.| |.:..||.||.::||:|:|.
Zfish   288 LTHTGLFHSHLENLQRLPAENILRQVTLSYGGFENRRNVVSVGGAFSLAEDPTRFKTVHCKLYPD 352

  Fly   406 FSFCP 410
            ..:||
Zfish   353 TEWCP 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fngNP_524191.1 Fringe 145..394 CDD:190308 126/249 (51%)
rfngNP_001001830.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..80 14/84 (17%)
Fringe 92..341 CDD:190308 126/249 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590172
Domainoid 1 1.000 255 1.000 Domainoid score I2008
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56433
Inparanoid 1 1.050 280 1.000 Inparanoid score I2878
OMA 1 1.010 - - QHG47481
OrthoDB 1 1.010 - - D356445at33208
OrthoFinder 1 1.000 - - FOG0002392
OrthoInspector 1 1.000 - - otm25671
orthoMCL 1 0.900 - - OOG6_104952
Panther 1 1.100 - - LDO PTHR10811
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4573
SonicParanoid 1 1.000 - - X1586
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

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