DRSC/TRiP Functional Genomics Resources

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Protein Alignment fng and Rfng

DIOPT Version :9

Sequence 1:NP_524191.1 Gene:fng / 40314 FlyBaseID:FBgn0011591 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_033079.1 Gene:Rfng / 19719 MGIID:894275 Length:332 Species:Mus musculus


Alignment Length:400 Identity:155/400 - (38%)
Similarity:199/400 - (49%) Gaps:81/400 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RFKRILQAMMLAVAVVYMTLLLYQSAYGYPGIQVPHSQVDALASEAVTTHRDQLLQDYVQSSTPT 76
            |.:|:|....||:|.|...|||.......|   :|.                             
Mouse     3 RARRVLCRACLALAAVLAVLLLLPLPLPLP---LPR----------------------------- 35

  Fly    77 QPGAGAPAASPTTVIIRKDIRSFNFSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQ 141
                 |||..|..|                   ||.:|..|       |:.|            |
Mouse    36 -----APAPDPDRV-------------------PTRSLTLE-------GDRL------------Q 57

  Fly   142 PPVTELDDIFISVKTTKNYHDTRLALIIKTWFQLARDQTWFFTDTDDHYYQEKTKGHLINTKCSQ 206
            |     ||:||:||||:..|..||.|:::||...|..||:.|||.||...|....|.:|||.||.
Mouse    58 P-----DDVFIAVKTTRKNHGPRLRLLLRTWISRAPRQTFIFTDGDDPELQMLAGGRMINTNCSA 117

  Fly   207 GHFRKALCCKMSAELDVFLESGKKWFCHFDDDNYVNVPRLVKLLDEYSPSVDWYLGKPSISSPLE 271
            ...|:|||||||.|.|.|||||:|||||.|||||||...|:.||..:|.:.|.|||:||:..|:|
Mouse   118 VRTRQALCCKMSVEYDKFLESGRKWFCHVDDDNYVNPKSLLHLLSTFSSNQDIYLGRPSLDHPIE 182

  Fly   272 IHLDSKNTTTNKKITFWFATGGAGFCLSRALTLKMLPIAGGGKFISIGDKIRFPDDVTMGFIIEH 336
            .....:...|:..:.||||||||||||||.|.|||.|.|..|.|:|..:::|.|||.|:|:|:|.
Mouse   183 ATERVQGGGTSNTVKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTAERVRLPDDCTVGYIVEG 247

  Fly   337 LLKVPLTVVDNFHSHLEPMEFIRQDTFQDQVSFSYAHMKNQWNVIKVDG-FDMKTDPKRFYSLHC 400
            ||...|.....||||||.::.:.......||:.||...:|..||:.|.| |:::.||.||.|:||
Mouse   248 LLGARLLHSPLFHSHLENLQRLPSGAILQQVTLSYGGPENPHNVVNVAGSFNIQQDPTRFQSVHC 312

  Fly   401 QLFPYFSFCP 410
            .|:|...:||
Mouse   313 LLYPDTHWCP 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fngNP_524191.1 Fringe 145..394 CDD:190308 121/249 (49%)
RfngNP_033079.1 Fringe 56..306 CDD:190308 124/266 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845572
Domainoid 1 1.000 242 1.000 Domainoid score I2217
eggNOG 1 0.900 - - E1_2C9I6
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56433
Inparanoid 1 1.050 261 1.000 Inparanoid score I3089
Isobase 1 0.950 - 0 Normalized mean entropy S5673
OMA 1 1.010 - - QHG47481
OrthoDB 1 1.010 - - D356445at33208
OrthoFinder 1 1.000 - - FOG0002392
OrthoInspector 1 1.000 - - otm43945
orthoMCL 1 0.900 - - OOG6_104952
Panther 1 1.100 - - LDO PTHR10811
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4573
SonicParanoid 1 1.000 - - X1586
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

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