DRSC/TRiP Functional Genomics Resources

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Protein Alignment fng and Lfng

DIOPT Version :9

Sequence 1:NP_524191.1 Gene:fng / 40314 FlyBaseID:FBgn0011591 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_596884.1 Gene:Lfng / 170905 RGDID:620587 Length:378 Species:Rattus norvegicus


Alignment Length:402 Identity:153/402 - (38%)
Similarity:224/402 - (55%) Gaps:36/402 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KRILQAMMLAVAVVYMTLLLYQSAYGYPGIQVPHSQVDALASEAVTTHRDQLLQDYVQSSTPTQP 78
            :|..:.::||:....:..||..:| ..|...||             ..|.:.....:..|:...|
  Rat     3 QRCGRRLLLALVGALLACLLVLTA-DPPPTPVP-------------AERGRRALRSLAGSSGAAP 53

  Fly    79 GAGAPAASPTTVIIRKDIRSFN--FSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQ 141
            |.|:.||....|::| ::.|.:  ||           |||   |..|:.:....::.|.....|:
  Rat    54 GPGSRAAVDPGVLVR-EVHSLSEYFS-----------LLT---RARRDADPPPGVASRQGDGHPR 103

  Fly   142 PPVTELD--DIFISVKTTKNYHDTRLALIIKTWFQLARDQTWFFTDTDDHYYQEKTKGHLINTKC 204
            ||...|.  |:||:||||:.:|..||.|:.:||....::.|:.|||.:|....:.| |:::.|.|
  Rat   104 PPAEVLSPRDVFIAVKTTRKFHRARLDLLFETWISRHKEMTFIFTDGEDEALAKHT-GNVVLTNC 167

  Fly   205 SQGHFRKALCCKMSAELDVFLESGKKWFCHFDDDNYVNVPRLVKLLDEYSPSVDWYLGKPSISSP 269
            |..|.|:||.|||:.|.|.|:|||||||||.|||||||:..|::||..|..:.|.|:||||:..|
  Rat   168 SAAHSRQALSCKMAVEYDRFIESGKKWFCHVDDDNYVNLRALLRLLASYPHTQDVYIGKPSLDRP 232

  Fly   270 LEIHLDSKNTTTNKKITFWFATGGAGFCLSRALTLKMLPIAGGGKFISIGDKIRFPDDVTMGFII 334
            ::. .:..:....:.:.|||||||||||:||.|.|||.|.|.||.|:|..::||.|||.|:|:|:
  Rat   233 IQA-TERISEHRVRPVHFWFATGGAGFCISRGLALKMGPWASGGHFMSTAERIRLPDDCTIGYIV 296

  Fly   335 EHLLKVPLTVVDNFHSHLEPMEFIRQDTFQDQVSFSYAHMKNQWNVIKVDG-FDMKTDPKRFYSL 398
            |.||.|||.....||||||.::.:......:||:.||...:|:.|.:.:.| |.::.||.||.|:
  Rat   297 EALLGVPLIRSGLFHSHLENLQQVPTTELHEQVTLSYGMFENKRNAVHIKGPFSVEADPSRFRSI 361

  Fly   399 HCQLFPYFSFCP 410
            ||.|:|...:||
  Rat   362 HCHLYPDTPWCP 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fngNP_524191.1 Fringe 145..394 CDD:190308 114/251 (45%)
LfngNP_596884.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 85..108 5/22 (23%)
Fringe 109..357 CDD:190308 114/249 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348983
Domainoid 1 1.000 238 1.000 Domainoid score I2221
eggNOG 1 0.900 - - E1_2C9I6
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 262 1.000 Inparanoid score I3016
OMA 1 1.010 - - QHG47481
OrthoDB 1 1.010 - - D356445at33208
OrthoFinder 1 1.000 - - FOG0002392
OrthoInspector 1 1.000 - - otm46033
orthoMCL 1 0.900 - - OOG6_104952
Panther 1 1.100 - - O PTHR10811
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1586
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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