Sequence 1: | NP_649266.1 | Gene: | CG32432 / 40310 | FlyBaseID: | FBgn0052432 | Length: | 1307 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_112612.2 | Gene: | Lrp4 / 83469 | RGDID: | 619731 | Length: | 1905 | Species: | Rattus norvegicus |
Alignment Length: | 1260 | Identity: | 228/1260 - (18%) |
---|---|---|---|
Similarity: | 379/1260 - (30%) | Gaps: | 436/1260 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 209 SSSTGCSLAEFSCSNGRCVPLSKYCNNLNDCGDGSDE-------PRFC-TRCNRTYYGDIGQTYA 265
Fly 266 LELHRPKQDRVPFVCVLTFTAAGGQHGDVVQVTLDSFTIGRFTSYVHEGCPDGYMQIAESARTPI 330
Fly 331 GGM--WCGSSW--------------GPVLFYS---ETRSLI-----FTIRLNRLARDQSGYNFDF 371
Fly 372 RIRYKVLSRDSSVTRYGGIKLAELAQWHN--RSSFLNQQQQQQQQQQQQQQQQQGAPGILED--- 431
Fly 432 ----FTNSSVARSDRYGQDFSLFSAYANNKTFM-ASLEKSLAKDEQNYTEPKYYLGDLIPGTYCS 491
Fly 492 RIFSDCDKKPCRLQSPNFPG-----------IYPRNLTCYYAVRQH---DVPH---------GKH 533
Fly 534 ALILVKQP----------KGNLVWIS--TQETAAANKMAPPPSASDKDKKFEPRLKTWNYCDYIQ 586
Fly 587 ENVKPKWKSTDYVTVYDGYTTRDPIILKFCG------------GGQAVPAAVSSGPELL------ 633
Fly 634 -----------------VEFSTSPFGTFTGTSSQVLPLYGFQLEV---------EVQFVDIQSPT 672
Fly 673 YSKNKKPCEFWIRGAGRGI-----LESPKHSLAPNSTCLYHLQGLGVFKTFDHLSLSRRTSSQSG 732
Fly 733 MHQPLSRFKVWISVLKFNLD--------PEFGQIDETSVGAIGVLQTQEDCSGMLRIWDGTLRDA 789
Fly 790 PVCKDLNCATETS-SYNTLGHYTHNSTSVIARFC--RGTIPRTCDRSNINETYARPCTISESYVS 851
Fly 852 TSDAITLELRNTESTVLRPLDFKLKYE----FIDLH-----------QDGLPWGGGEHDCNRKFL 901
Fly 902 SSMMDRKDPAIFRSV----RNIFLFGRGGTRNLKCIYKFEAQRGERVRIKMRKVTTTNRPCYSRV 962
Fly 963 DEDINRSFCYGDTNVRIEIFE-RPYHDSILLHRGCMCNSSNQSH-------------LPVEY--- 1010
Fly 1011 ------TSTSRDVEVHFIAQNM------TTLDDPDTVNFEGMFEFV---------KAPTSCKDG- 1053
Fly 1054 ------RRKFG-PSG-TIDMT---------------FGDVECRSRPWLIEPSNGNKFLYVRLKAI 1095
Fly 1096 FLSKHNPTQTLNATYVQTDTWRCETKSRAVLTTSEGLTIVACPLSPDSNAYEFVEIFSSGWNERP 1160
Fly 1161 NFALVNRSRAISVEFLRPGNGEYSFNWMELIPRPTLSMAEDCQFKCAELGACVNASVWCDGVVHC 1225
Fly 1226 PSG------------DDETFLQCSA 1238 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG32432 | NP_649266.1 | LDLa | 214..245 | CDD:197566 | 16/30 (53%) |
CUB | 503..646 | CDD:238001 | 31/212 (15%) | ||
LDLa | 1203..1231 | CDD:197566 | 6/39 (15%) | ||
Lrp4 | NP_112612.2 | LDLa | 27..66 | CDD:238060 | |
Ldl_recept_a | 70..105 | CDD:278486 | |||
LDLa | 110..142 | CDD:238060 | |||
LDLa | 148..182 | CDD:238060 | |||
LDLa | 231..265 | CDD:238060 | |||
LDLa | 270..304 | CDD:238060 | |||
LDLa | 311..343 | CDD:197566 | 16/31 (52%) | ||
FXa_inhibition | 358..393 | CDD:291342 | 9/55 (16%) | ||
EGF_CA | 395..434 | CDD:214542 | 7/40 (18%) | ||
NHL | <471..622 | CDD:302697 | 34/189 (18%) | ||
NHL repeat | 471..507 | CDD:271320 | 7/53 (13%) | ||
LDL-receptor class B 1 | 480..522 | 6/41 (15%) | |||
LY | 505..545 | CDD:214531 | 7/45 (16%) | ||
NHL repeat | 510..550 | CDD:271320 | 8/45 (18%) | ||
LDL-receptor class B 2 | 523..565 | 11/58 (19%) | |||
NHL repeat | 555..589 | CDD:271320 | 8/48 (17%) | ||
LDL-receptor class B 3 | 566..609 | 10/46 (22%) | |||
LY | 590..632 | CDD:214531 | 9/41 (22%) | ||
NHL repeat | 598..622 | CDD:271320 | 8/23 (35%) | ||
LDL-receptor class B 4 | 610..652 | 6/41 (15%) | |||
LY | 633..673 | CDD:214531 | 7/39 (18%) | ||
LDL-receptor class B 5 | 653..693 | 8/63 (13%) | |||
FXa_inhibition | 702..>729 | CDD:291342 | 6/26 (23%) | ||
LY | 766..806 | CDD:214531 | 11/45 (24%) | ||
LDL-receptor class B 6 | 785..827 | 12/47 (26%) | |||
LY | 808..850 | CDD:214531 | 8/52 (15%) | ||
LDL-receptor class B 7 | 828..870 | 8/57 (14%) | |||
LDL-receptor class B 8 | 871..914 | 10/50 (20%) | |||
Ldl_recept_b | 871..911 | CDD:278487 | 9/47 (19%) | ||
LY | 895..937 | CDD:214531 | 5/41 (12%) | ||
LDL-receptor class B 9 | 915..956 | 5/42 (12%) | |||
LY | 938..979 | CDD:214531 | 6/44 (14%) | ||
LDL-receptor class B 10 | 957..998 | 8/42 (19%) | |||
FXa_inhibition | 1006..1043 | CDD:291342 | 10/44 (23%) | ||
NHL | <1085..1277 | CDD:302697 | 37/208 (18%) | ||
NHL repeat | 1085..1123 | CDD:271320 | 6/37 (16%) | ||
LDL-receptor class B 11 | 1093..1135 | 7/41 (17%) | |||
NHL repeat | 1128..1161 | CDD:271320 | 8/33 (24%) | ||
LDL-receptor class B 12 | 1136..1178 | 9/42 (21%) | |||
NHL repeat | 1166..1203 | CDD:271320 | 8/36 (22%) | ||
LDL-receptor class B 13 | 1179..1222 | 10/42 (24%) | |||
NHL repeat | 1212..1244 | CDD:271320 | 6/31 (19%) | ||
LDL-receptor class B 14 | 1223..1263 | 7/55 (13%) | |||
NHL repeat | 1253..1277 | CDD:271320 | 5/23 (22%) | ||
LDL-receptor class B 15 | 1264..1306 | 11/58 (19%) | |||
FXa_inhibition | 1313..1348 | CDD:291342 | 12/61 (20%) | ||
LY | 1379..1418 | CDD:214531 | |||
LDL-receptor class B 16 | 1397..1439 | ||||
LY | 1420..1460 | CDD:214531 | |||
LDL-receptor class B 17 | 1440..1482 | ||||
LDL-receptor class B 18 | 1483..1526 | ||||
Ldl_recept_b | 1483..1523 | CDD:278487 | |||
LY | 1507..1547 | CDD:214531 | |||
LDL-receptor class B 19 | 1527..1568 | ||||
LY | 1549..1589 | CDD:214531 | |||
LDL-receptor class B 20 | 1569..1610 | ||||
FXa_inhibition | 1617..>1641 | CDD:291342 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1659..1696 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1853..1905 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |