DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32432 and lrp13

DIOPT Version :9

Sequence 1:NP_649266.1 Gene:CG32432 / 40310 FlyBaseID:FBgn0052432 Length:1307 Species:Drosophila melanogaster
Sequence 2:XP_021327248.1 Gene:lrp13 / 562438 ZFINID:ZDB-GENE-130729-1 Length:1354 Species:Danio rerio


Alignment Length:562 Identity:113/562 - (20%)
Similarity:183/562 - (32%) Gaps:191/562 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   757 QIDETSVGAIGVLQT-----QEDCSGMLRIWDGTLRDAPVCKDLNCATETSSYNTLGHY--THNS 814
            |:.|...|.  ||.|     :.||.      ||:..|       ||.|..|    :||:  .|..
Zfish    41 QLCEDRSGC--VLNTHLCDGENDCD------DGSDED-------NCPTVCS----VGHFQCAHGK 86

  Fly   815 TSV-IARFCRGTIPRTCDRSN-IN-----ETYARPC-----TISESYVSTSDAITLELRNTESTV 867
            ..: :.:.|.| :|:..|||: :|     :..|..|     .:.||:|...|...:: .:.|:..
Zfish    87 MCIWLRQVCDG-VPQCQDRSDELNCFKPDDGCAHRCDGNTRCVPESFVCDGDVDCVD-GSDEANC 149

  Fly   868 LRPLD--------FKLKYEFIDLHQ--DGLPWGGGEHDCNRKFLSSMM--DRKDPAIFRSVRNIF 920
            ..|.|        ...|.|....|:  ..:|...|...|:   ::|.:  |..|..:...|.:..
Zfish   150 ENPDDDDDDDEDLLDEKEEMTGEHEVSQNVPATKGPLRCS---IASKLCRDGTDCVMLNHVCDGE 211

  Fly   921 LFGRGGTRNLKCIY-----KFEAQRGERVRIKMRKVTTTNRPCYSRVDEDINRSFCYGDTNVRIE 980
            |..:.|:....|..     :|:...|::. |..|::......|..|.|| :|   |:        
Zfish   212 LDCKDGSDEEDCPVQCESGQFQCAHGKKC-IDRRQLCDGVPQCQDRSDE-LN---CF-------- 263

  Fly   981 IFERPYHDSILLHRGCMCNSSNQSHLPVEYTSTSRDVEVHFIAQNMTTLDDPDTVNFEGMFEFVK 1045
               :|  |....||   |:.:            :|.|...|:...     |||.|:         
Zfish   264 ---KP--DDDCAHR---CDEN------------TRCVPESFVCDG-----DPDCVD--------- 294

  Fly  1046 APTSCKDGRRKFGPSGTIDMTFGDVECRSRPWLIEPSNGNKFLYVRLKAIFLS----------KH 1100
                           |:.:...|:..|.|..|  :.|:|        :.:.||          .|
Zfish   295 ---------------GSDEANCGEESCSSAEW--QCSSG--------QCVSLSMRCDGHSDCRDH 334

  Fly  1101 N--------PTQTLNATYVQT-----DTWRCETKSRAVLTTSEGLTIVACPLSP-DSNAYEF--- 1148
            :        |..:.|....::     |.|.|:.::    ...:|.....|..|| ....|:|   
Zfish   335 SDEEDCAEPPPCSTNRRCPKSHECLLDEWMCDGET----DCKDGTDEKNCKESPVQCGEYQFSCS 395

  Fly  1149 --VEIFSSGWNERPNFALVNRSRAISVEFLRPGNGEYSFNWMELIPRPTLSMAEDCQFKCAELGA 1211
              .:.....|            |....|..|.|:.|.:...:...|.         .|:|.. ..
Zfish   396 SKTQCIPQSW------------RCDGSEDCRDGSDESACASVSCPPH---------LFQCGS-SE 438

  Fly  1212 CVNASVWCDGVVHCPSGDDE----TFLQCSALMKLPAEILAT 1249
            ||..|..|:||.:|..|.||    ...:||..:|...:..:|
Zfish   439 CVEFSQLCNGVTNCLDGSDEGGSCQTEKCSEQLKCAQDCHST 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32432NP_649266.1 LDLa 214..245 CDD:197566
CUB 503..646 CDD:238001
LDLa 1203..1231 CDD:197566 10/27 (37%)
lrp13XP_021327248.1 LDLa 36..71 CDD:238060 11/44 (25%)
LDLa 75..110 CDD:238060 10/39 (26%)
LDLa 119..149 CDD:238060 6/30 (20%)
LDLa 195..223 CDD:238060 5/27 (19%)
LDLa 227..262 CDD:238060 9/39 (23%)
LDLa 271..301 CDD:238060 11/73 (15%)
LDLa 306..340 CDD:238060 8/43 (19%)
LDLa 351..380 CDD:238060 4/32 (13%)
LDLa 387..422 CDD:238060 8/46 (17%)
LDLa 427..458 CDD:197566 11/40 (28%)
EGF_CA 503..542 CDD:311536
PHA02142 <569..>666 CDD:333147
LY <622..648 CDD:214531
Ldl_recept_b 680..718 CDD:278487
LY 702..744 CDD:214531
LY 744..786 CDD:214531
FXa_inhibition 818..848 CDD:317114
LY 976..1021 CDD:214531
FXa_inhibition 1130..1162 CDD:317114
LDLa 1170..1202 CDD:197566
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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