DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32432 and arr

DIOPT Version :10

Sequence 1:NP_649266.1 Gene:CG32432 / 40310 FlyBaseID:FBgn0052432 Length:1307 Species:Drosophila melanogaster
Sequence 2:NP_524737.2 Gene:arr / 44279 FlyBaseID:FBgn0000119 Length:1678 Species:Drosophila melanogaster


Alignment Length:771 Identity:144/771 - (18%)
Similarity:230/771 - (29%) Gaps:311/771 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   568 KDKKFEPRLKTWNYCDYIQENVKPKWKSTDYVTVYDGYTTRDPII--LKFCGG----GQAVPAAV 626
            |..:.||:|     |..|..|.....|:|.......|...|..:|  |..|.|    .|.....:
  Fly     8 KSAEIEPQL-----CQVIDNNEDVTTKATKCTKSNSGVGWRQMLIGFLLICFGISNSWQYKNVHM 67

  Fly   627 SSGPELLVEFSTSPFGTFTGTSSQVLPLYGFQLEVEVQFVDIQSPT------------------- 672
            .|...|:   ::.|...|..|.:.:|    |....::|..:|..||                   
  Fly    68 PSSSSLI---ASPPASAFVNTPATLL----FTTRHDIQVANITRPTGGPQIDVIVRDLAEAMAID 125

  Fly   673 --YSKNKKPCEFWIRGAGRGILESPKHSLAPNSTCLYHLQGLGVFKTFDHLSLSRRTSSQSGMHQ 735
              |:|| ..|  | ..:||.|:|..:    .||:.|..|           |...::|...:|:.:
  Fly   126 FYYAKN-LVC--W-TDSGREIIECAQ----TNSSALQPL-----------LRAPKQTVISTGLDK 171

  Fly   736 PLSRFKVWISVLKFNLDPEFGQIDETSVGAIGVLQTQEDCSGMLRIWDGTLRDAPVCKDLNCATE 800
            |......|.:...:..|.|..:|:         :.|.:.....:..|  |..|.|....:..|.:
  Fly   172 PEGLAMDWYTDKIYWTDGEKNRIE---------VATLDGRYQKVLFW--TDLDQPRAVAVVPARK 225

  Fly   801 TSSYNTLGHYTHNSTSVIARFCRGTIPRTCDRSNINETYARPCTISESYVSTSDAITLELRNTES 865
            ...:...|.|                |: .:|::::.......|:.:.:|...:.:.::|:|   
  Fly   226 LLIWTDWGEY----------------PK-IERASMDGDPLSRMTLVKEHVFWPNGLAVDLKN--- 270

  Fly   866 TVLRPLDFKLKYEFIDLHQDGLPWGGGEHDCNRKFLSSMMDRKDPAIFRSVRNIFLFGRGGTRNL 930
                    :|.|           |..|:|    .|:..|  |.|.:..|::.|          ||
  Fly   271 --------ELIY-----------WTDGKH----HFIDVM--RLDGSSRRTIVN----------NL 300

  Fly   931 KC----------IYKFEAQRGE------RVRIKMRKVTTTNRPCYSRV-DEDINRSFCYGDTNVR 978
            |.          :|..:.|||.      :.|.....:.|...|...|. |..:            
  Fly   301 KYPFSLTFYDDRLYWTDWQRGSLNALDLQTRELKELIDTPKAPNSVRAWDPSL------------ 353

  Fly   979 IEIFERPYHDSILLHRGCMCNSSNQSHLPVEYTST--------------------SRDVEVHFIA 1023
                 :||.|:     .|..|:.|.|||.:..|::                    :...|:.||.
  Fly   354 -----QPYEDN-----PCAHNNGNCSHLCLLATNSQGFSCACPTGVKLISANTCANGSQEMMFIV 408

  Fly  1024 Q----NMTTLDDPD---------------TVNFEGMFEFV--------KAPTSCKDGRRKFGPSG 1061
            |    :..:||.||               .::::.:.|.:        ....:..||      :|
  Fly   409 QRTQISKISLDSPDYTIFPLPLGKVKYAIAIDYDPVEEHIYWSDVETYTIKRAHADG------TG 467

  Fly  1062 TIDMTFGDV---ECRSRPWLIEPSNGNKFLYVRLKAIFLSKHNPTQTLNATYVQTDTWRCETKSR 1123
            ..|....:|   :..:..||..                          |..:..|.|.|.|    
  Fly   468 VTDFVTSEVRHPDGLALDWLAR--------------------------NLYWTDTVTDRIE---- 502

  Fly  1124 AVLTTSEGLTIVACPLSPDSNA-----YEFVE-------------IFSSGWNER----PNFALVN 1166
                        .|.|  |..|     ||.:|             :|.|.||||    ...:|..
  Fly   503 ------------VCRL--DGTARKVLIYEHLEEPRAIAVAPSLGWMFWSDWNERKPKVERASLDG 553

  Fly  1167 RSRAISV-EFLRPGNGEYSFNWMELIPRPTLSMAEDCQFKCAELGACVNASVWCDG 1221
            ..|.:.| |.|...||                :|.|.:.|         |..||||
  Fly   554 SERVVLVSENLGWPNG----------------IALDIEAK---------AIYWCDG 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32432NP_649266.1 LDLa 214..245 CDD:197566
CUB 503..646 CDD:238001 20/83 (24%)
LDLa 1203..1231 CDD:197566 6/19 (32%)
arrNP_524737.2 LY 162..201 CDD:214531 8/47 (17%)
NHL 168..503 CDD:302697 74/470 (16%)
NHL repeat 172..237 CDD:271320 13/91 (14%)
LY 252..293 CDD:214531 13/68 (19%)
NHL repeat 261..298 CDD:271320 12/64 (19%)
NHL repeat 303..339 CDD:271320 5/35 (14%)
NHL repeat 341..419 CDD:271320 17/99 (17%)
NHL repeat 428..476 CDD:271320 5/53 (9%)
LY 472..511 CDD:214531 11/82 (13%)
NHL repeat 477..503 CDD:271320 7/67 (10%)
Ldl_recept_b 534..574 CDD:459654 14/55 (25%)
LY 558..599 CDD:214531 13/52 (25%)
LY 600..641 CDD:214531
FXa_inhibition 668..703 CDD:464251
YncE <736..886 CDD:442618
LY 776..818 CDD:214531
LY 905..946 CDD:214531
FXa_inhibition 973..1010 CDD:464251
YncE <1047..1191 CDD:442618
LDLa 1319..1362 CDD:238060
LDLa 1365..1399 CDD:238060
LDLa 1399..1433 CDD:197566
Blue background indicates that the domain is not in the aligned region.

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