DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32432 and Lrp3

DIOPT Version :9

Sequence 1:NP_649266.1 Gene:CG32432 / 40310 FlyBaseID:FBgn0052432 Length:1307 Species:Drosophila melanogaster
Sequence 2:NP_001019878.1 Gene:Lrp3 / 435965 MGIID:3584516 Length:790 Species:Mus musculus


Alignment Length:57 Identity:24/57 - (42%)
Similarity:31/57 - (54%) Gaps:1/57 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 SISSSLGPGKPVNLQLAPGS-SSTGCSLAEFSCSNGRCVPLSKYCNNLNDCGDGSDE 245
            |.:||.|..:...|....|. ..|.|...||.|.||:|:|....||.:::|||||||
Mouse   162 SDASSSGQAQGFRLSYIRGKLGQTSCQTDEFRCDNGKCLPGPWQCNMVDECGDGSDE 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32432NP_649266.1 LDLa 214..245 CDD:197566 15/30 (50%)
CUB 503..646 CDD:238001
LDLa 1203..1231 CDD:197566
Lrp3NP_001019878.1 CUB 64..177 CDD:238001 5/14 (36%)
LDLa 187..221 CDD:238060 17/32 (53%)
LDLa 233..270 CDD:238060
CUB 275..385 CDD:238001
LDLa 436..472 CDD:238060
LDLa 475..509 CDD:238060
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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