DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32432 and LpR2

DIOPT Version :9

Sequence 1:NP_649266.1 Gene:CG32432 / 40310 FlyBaseID:FBgn0052432 Length:1307 Species:Drosophila melanogaster
Sequence 2:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster


Alignment Length:421 Identity:84/421 - (19%)
Similarity:117/421 - (27%) Gaps:198/421 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 CLP--SEQHRNVAKMRL--------KVSTSATQCRAIKATETPATSKMTSSCSGHCQSQQQQQQQ 120
            |:|  :|..:...:..|        :.|:|::.||     |...||....|.|.|.||:.||   
  Fly     5 CMPHFTEYFQTTTQSELTTNESANSRSSSSSSGCR-----EPSKTSGFFYSASTHYQSKVQQ--- 61

  Fly   121 QHQLQQQHQQSQH-------------------------------QQRRHPLPATLTLLLCLGISL 154
              .:......|.|                               .:..|.|..:..|......:|
  Fly    62 --LISFSFTSSFHLLFITCILSISKFCNAAAVNAAHVTAATPTASEIMHNLSGSALLERLKASTL 124

  Fly   155 GMA-------ATAAAAGGGGGGGGGAAPVSGSGAAGFPSSSSS-----------ISSSLGPGKPV 201
            |..       |.|||.....|.|.|    .|.|...|.||.:|           :|..:|....:
  Fly   125 GPTLDQLKHLAPAAANSISPGTGSG----MGIGMGHFGSSINSVLNGNPLKFLNVSGKIGTPLDI 185

  Fly   202 NLQLA----------------------PGSS----------------STGCSLAEFSCSNGRCVP 228
            :|.|:                      .|||                .:.||..:|.|.||:|:|
  Fly   186 SLGLSNYCDEKQFQCSTGECIPIRFVCDGSSDCPDHSDERLEECKFTESTCSQEQFRCGNGKCIP 250

  Fly   229 LSKYCNNLNDCGDGSDEP---------------------------------RFC------TRCNR 254
            ....|:..|||.|||||.                                 :.|      .:|||
  Fly   251 RRWVCDRENDCADGSDESTSQCRSHTCSPEEFACKSGEGECIPLSWMCDQNKDCRDGSDEAQCNR 315

  Fly   255 TYYGDIGQTYALELHRPKQDRVPFVCVLTFTAAGGQHGDVVQVTLDSFTIGRFTSYVHEGCPDG- 318
            |...|                 .|.|         .:|..:|        .||.....:.|.|| 
  Fly   316 TCRSD-----------------EFTC---------GNGRCIQ--------NRFKCDDDDDCGDGS 346

  Fly   319 -YMQIAESARTPIGGMWCGSSW-----GPVL 343
             .....|.|:       |||::     ||.:
  Fly   347 DEKNCGEKAK-------CGSNFFACKSGPCI 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32432NP_649266.1 LDLa 214..245 CDD:197566 15/30 (50%)
CUB 503..646 CDD:238001
LDLa 1203..1231 CDD:197566
LpR2NP_001097928.1 LDLa 193..224 CDD:197566 3/30 (10%)
LDLa 235..267 CDD:197566 15/31 (48%)
LDLa 277..313 CDD:238060 1/35 (3%)
LDLa 356..388 CDD:197566 5/22 (23%)
LDLa 400..432 CDD:197566
LDLa 442..476 CDD:238060
LDLa 484..517 CDD:197566
FXa_inhibition 527..562 CDD:291342
EGF_CA 564..594 CDD:214542
LY 675..715 CDD:214531
LY 717..760 CDD:214531
LY 763..803 CDD:214531
FXa_inhibition 877..918 CDD:291342
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.