| Sequence 1: | NP_649266.1 | Gene: | CG32432 / 40310 | FlyBaseID: | FBgn0052432 | Length: | 1307 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_005155618.1 | Gene: | vldlr / 393897 | ZFINID: | ZDB-GENE-040426-803 | Length: | 877 | Species: | Danio rerio |
| Alignment Length: | 460 | Identity: | 88/460 - (19%) |
|---|---|---|---|
| Similarity: | 142/460 - (30%) | Gaps: | 132/460 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 208 GSSSTGC-------SLAEFSCSNGRCVPLSKYCNNLNDCGDGSDEPRFCTRCNRTYYGDIGQTYA 265
Fly 266 LELHRPKQDRVPFVCVLTFTAAGGQHGDVVQVTLDSFTIGRFTSYVHEG---------------- 314
Fly 315 CPDGYMQIAESARTPIGGMWCGSSWGPVLFYSETRSLIFTIRLNRLARDQSGYNFDFRIRYKVLS 379
Fly 380 RDSSVTRYGGIKLAELAQWHNRSSFLNQQQQQQQQQQQQQQQQQGAPGILEDFTNSSVARSDRYG 444
Fly 445 QDFSLFSAYANNKTFM----------------------------ASLEKS--LAKDEQNYTE--- 476
Fly 477 --PKYYLGDLIPGTYC---SRIFSDC------DKKPCRLQSPNFPGIYPRNLTCYYAVRQHDVPH 530
Fly 531 GKHALILVKQPKGNLVWISTQETA--AANKMAPPPSASDKDKKFEP----------RLKTWNYCD 583
Fly 584 YIQEN 588 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG32432 | NP_649266.1 | LDLa | 214..245 | CDD:197566 | 14/37 (38%) |
| CUB | 503..646 | CDD:238001 | 19/98 (19%) | ||
| LDLa | 1203..1231 | CDD:197566 | |||
| vldlr | XP_005155618.1 | LDLa | 29..63 | CDD:238060 | |
| LDLa | 67..99 | CDD:197566 | |||
| Ldl_recept_a | 107..145 | CDD:278486 | |||
| Ldl_recept_a | 149..184 | CDD:278486 | |||
| Ldl_recept_a | 234..269 | CDD:278486 | |||
| Ldl_recept_a | 272..308 | CDD:278486 | 1/5 (20%) | ||
| LDLa | 316..346 | CDD:238060 | 13/29 (45%) | ||
| FXa_inhibition | 356..390 | CDD:291342 | 8/48 (17%) | ||
| EGF_CA | 392..426 | CDD:214542 | 4/39 (10%) | ||
| NHL | 479..>570 | CDD:302697 | 13/93 (14%) | ||
| LY | 504..541 | CDD:214531 | 6/36 (17%) | ||
| NHL repeat | 511..551 | CDD:271320 | 6/39 (15%) | ||
| Ldl_recept_b | 564..604 | CDD:278487 | 8/39 (21%) | ||
| LY | 588..630 | CDD:214531 | 10/41 (24%) | ||
| Ldl_recept_b | 651..690 | CDD:278487 | 7/38 (18%) | ||
| FXa_inhibition | 707..745 | CDD:291342 | 2/2 (100%) | ||
| Mucin | <723..817 | CDD:250634 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||