DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32432 and Lrp12

DIOPT Version :10

Sequence 1:NP_649266.1 Gene:CG32432 / 40310 FlyBaseID:FBgn0052432 Length:1307 Species:Drosophila melanogaster
Sequence 2:NP_001128355.1 Gene:Lrp12 / 314941 RGDID:1304943 Length:858 Species:Rattus norvegicus


Alignment Length:983 Identity:185/983 - (18%)
Similarity:302/983 - (30%) Gaps:382/983 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   481 LGDLIPGTYCSRIFSDCDKKPCRLQ-------SPNFPGIYPRNLTCYYAVRQH------------ 526
            |.:|....:.|.:.:.|.:.|.:::       ||.:|..||..:.|.:.:|.:            
  Rat    31 LAELSENVHISGVSTACGETPEQIRGPTGIITSPGWPSDYPAKINCSWLIRANPGEIITISFQDF 95

  Fly   527 DVPHGKHALILVKQPKGNLVWISTQET-------AAANKMAPPPSASDKDKKFEPRLKTWNYCDY 584
            |:...:..         .|.|: |.||       .|.....|||..|.                 
  Rat    96 DIQGSRRC---------TLDWL-TIETYKNIESYRACGSTIPPPYISS----------------- 133

  Fly   585 IQENVKPKWKSTDYVT------VYDGYTTRDPIIL--KF-CGGGQAVPAA----------VSSGP 630
             |::|..::.|.|.|:      .|....:.:|...  :| ||.|:.:|.|          .||..
  Rat   134 -QDHVWIRFHSDDSVSRKGFRLAYFSGKSEEPHCACDQFRCGNGKCIPEAWKCNSMDECGDSSDE 197

  Fly   631 ELLVEFSTSPFGTFTGTSSQVLPLYGFQ------------------------LEVEVQFVDIQSP 671
            |:.|:.:..|    |.|:.|......||                        |::..: :|...|
  Rat   198 EVCVQDAHPP----TTTAFQPCAYNQFQCLSRFTKVYTCLPESLKCDGNIDCLDLGDE-IDCDMP 257

  Fly   672 TYSKNKKPCEFWIRGAGRGILESPKHS--LAPNSTCLYHLQGLGVFKTFDHLSLSRRTSSQSGMH 734
            |       |..|:: ...|...||.:.  ..|.|.|.:      :..|.||..:           
  Rat   258 T-------CGQWLK-YFYGTFSSPNYPDFYPPGSNCTW------LIDTGDHRKV----------- 297

  Fly   735 QPLSRFKVWISVLKFNLDPEFGQIDETSVGAIGVLQTQEDCSGMLRIWDGTLRDAPVCKDLNCAT 799
                       :|:|.   :| ::|.|..|            ..::|:|| |.:.| .|.|...|
  Rat   298 -----------ILRFT---DF-KLDGTGYG------------DYVKIYDG-LEENP-RKLLRVLT 333

  Fly   800 ETSSYNTLG----------HYT---------HNSTSVIARFCRG------------TIPRTCD-- 831
            ...|:..|.          |:.         .|:|..:..||..            |..:.||  
  Rat   334 AFDSHAPLTVVSSSGQIRVHFCADKVNAARGFNATYQVDGFCLPWEIPCGGNWGCYTEQQRCDGY 398

  Fly   832 ------RSNINETYARPCTISESYVSTSDAITLELRNTESTVLRPLDFKLKYEFIDLHQDGLPWG 890
                  |..||      ||:.:..         |...:.:.|..|...:..|      |:..|.|
  Rat   399 WHCPNGRDEIN------CTMCQKE---------EFPCSRNGVCYPRSDRCNY------QNHCPNG 442

  Fly   891 GGEHDC------------NR-KFLSSMMDRKD---------------------PAIFRSV--RNI 919
            ..|.:|            || .|.|.:.|.:|                     .|:..|:  ..:
  Rat   443 SDEKNCFFCQPGNFHCKNNRCVFESWVCDSQDDCGDGSDEESCPVIVPTRVITAAVIGSLVCGLL 507

  Fly   920 FLFGRGGTRNLKCIYKFEAQRGER--VRIKMRKVTTTNRPCYSRV--------DEDI-----NRS 969
            .:...|.|..|..:..||.:..|.  .|::...:.....|.|.::        .||.     |::
  Rat   508 LVIALGCTCKLYSLRMFERRSFETQLSRVEAELLRREAPPSYGQLIAQGLIPPVEDFPVCSPNQA 572

  Fly   970 FC-----------YGDTNVRI-------EIFERPYHDSILLHRGCMCNSSNQSHLPVEYTSTSRD 1016
            ..           .|..::|:       .|:.|.::.:...|.|.:...|......|...|:||:
  Rat   573 SVLENLRLAVRSQLGFPSIRLPMTGRSRNIWNRIFNFARSRHSGSLALVSGDGDEVVPSQSSSRE 637

  Fly  1017 VE---VH---FIAQNMTTLDDPDTVN----FEGMFEFVKAPTSCKDGRRKFGPSGTIDMTF---G 1068
            .|   .|   |.|::    ||.||.|    ..|....|.||..     :|..|:..::.|.   |
  Rat   638 TERSHPHRSLFSAES----DDTDTENERRDTAGASGGVAAPLP-----QKVPPTTAVEATVGTGG 693

  Fly  1069 DVECRSRPWLIEPSNGNKFLYVRLKAIFLSKHNPTQTLNATYVQTDTWRCETKSRAVLTTSEGLT 1133
            :...:|...  ..::|.:...|...::..::|..|..|:                   ..::||.
  Rat   694 NSSAQSTRG--GHADGREVSSVEAPSVSPARHQLTSALS-------------------RMTQGLR 737

  Fly  1134 IVACPLSPDSNAYEFVEIFSSGWNERP----NFALVNRSRAISVEFLRP-GNGEYSFNWMELIPR 1193
            .|...|...|         |:..|..|    :..:..|.....||.|.| .:|....:..| ..|
  Rat   738 WVRFTLGRSS---------STNQNRSPLRQLDTGVSGREDDDDVEMLIPVSDGASDIDANE-CSR 792

  Fly  1194 PTLSMAED------------------------CQFKC-----AEL-GACVNASVWCDGVVHCPSG 1228
            |.|.:|.|                        |: :|     |:: ..|:.|:|..:.   |   
  Rat   793 PLLDLASDQVQGFRQPHSSGNPGARTSNRDGPCE-RCGIVHTAQIPDTCLEAAVKTEA---C--- 850

  Fly  1229 DDETFLQC 1236
            |||..|.|
  Rat   851 DDEALLLC 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32432NP_649266.1 LDLa 214..245 CDD:197566
CUB 503..646 CDD:238001 36/187 (19%)
LDLa 1203..1231 CDD:197566 7/33 (21%)
Lrp12NP_001128355.1 CUB 47..158 CDD:238001 26/138 (19%)
LDLa 166..200 CDD:238060 9/33 (27%)
LDLa 215..254 CDD:238060 3/39 (8%)
CUB 267..371 CDD:238001 28/149 (19%)
LDLa 413..448 CDD:238060 8/49 (16%)
LDLa 451..485 CDD:238060 6/33 (18%)
Blue background indicates that the domain is not in the aligned region.

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