DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32432 and Lrp12

DIOPT Version :9

Sequence 1:NP_649266.1 Gene:CG32432 / 40310 FlyBaseID:FBgn0052432 Length:1307 Species:Drosophila melanogaster
Sequence 2:NP_001128355.1 Gene:Lrp12 / 314941 RGDID:1304943 Length:858 Species:Rattus norvegicus


Alignment Length:983 Identity:185/983 - (18%)
Similarity:302/983 - (30%) Gaps:382/983 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   481 LGDLIPGTYCSRIFSDCDKKPCRLQ-------SPNFPGIYPRNLTCYYAVRQH------------ 526
            |.:|....:.|.:.:.|.:.|.:::       ||.:|..||..:.|.:.:|.:            
  Rat    31 LAELSENVHISGVSTACGETPEQIRGPTGIITSPGWPSDYPAKINCSWLIRANPGEIITISFQDF 95

  Fly   527 DVPHGKHALILVKQPKGNLVWISTQET-------AAANKMAPPPSASDKDKKFEPRLKTWNYCDY 584
            |:...:..         .|.|: |.||       .|.....|||..|.                 
  Rat    96 DIQGSRRC---------TLDWL-TIETYKNIESYRACGSTIPPPYISS----------------- 133

  Fly   585 IQENVKPKWKSTDYVT------VYDGYTTRDPIIL--KF-CGGGQAVPAA----------VSSGP 630
             |::|..::.|.|.|:      .|....:.:|...  :| ||.|:.:|.|          .||..
  Rat   134 -QDHVWIRFHSDDSVSRKGFRLAYFSGKSEEPHCACDQFRCGNGKCIPEAWKCNSMDECGDSSDE 197

  Fly   631 ELLVEFSTSPFGTFTGTSSQVLPLYGFQ------------------------LEVEVQFVDIQSP 671
            |:.|:.:..|    |.|:.|......||                        |::..: :|...|
  Rat   198 EVCVQDAHPP----TTTAFQPCAYNQFQCLSRFTKVYTCLPESLKCDGNIDCLDLGDE-IDCDMP 257

  Fly   672 TYSKNKKPCEFWIRGAGRGILESPKHS--LAPNSTCLYHLQGLGVFKTFDHLSLSRRTSSQSGMH 734
            |       |..|:: ...|...||.:.  ..|.|.|.:      :..|.||..:           
  Rat   258 T-------CGQWLK-YFYGTFSSPNYPDFYPPGSNCTW------LIDTGDHRKV----------- 297

  Fly   735 QPLSRFKVWISVLKFNLDPEFGQIDETSVGAIGVLQTQEDCSGMLRIWDGTLRDAPVCKDLNCAT 799
                       :|:|.   :| ::|.|..|            ..::|:|| |.:.| .|.|...|
  Rat   298 -----------ILRFT---DF-KLDGTGYG------------DYVKIYDG-LEENP-RKLLRVLT 333

  Fly   800 ETSSYNTLG----------HYT---------HNSTSVIARFCRG------------TIPRTCD-- 831
            ...|:..|.          |:.         .|:|..:..||..            |..:.||  
  Rat   334 AFDSHAPLTVVSSSGQIRVHFCADKVNAARGFNATYQVDGFCLPWEIPCGGNWGCYTEQQRCDGY 398

  Fly   832 ------RSNINETYARPCTISESYVSTSDAITLELRNTESTVLRPLDFKLKYEFIDLHQDGLPWG 890
                  |..||      ||:.:..         |...:.:.|..|...:..|      |:..|.|
  Rat   399 WHCPNGRDEIN------CTMCQKE---------EFPCSRNGVCYPRSDRCNY------QNHCPNG 442

  Fly   891 GGEHDC------------NR-KFLSSMMDRKD---------------------PAIFRSV--RNI 919
            ..|.:|            || .|.|.:.|.:|                     .|:..|:  ..:
  Rat   443 SDEKNCFFCQPGNFHCKNNRCVFESWVCDSQDDCGDGSDEESCPVIVPTRVITAAVIGSLVCGLL 507

  Fly   920 FLFGRGGTRNLKCIYKFEAQRGER--VRIKMRKVTTTNRPCYSRV--------DEDI-----NRS 969
            .:...|.|..|..:..||.:..|.  .|::...:.....|.|.::        .||.     |::
  Rat   508 LVIALGCTCKLYSLRMFERRSFETQLSRVEAELLRREAPPSYGQLIAQGLIPPVEDFPVCSPNQA 572

  Fly   970 FC-----------YGDTNVRI-------EIFERPYHDSILLHRGCMCNSSNQSHLPVEYTSTSRD 1016
            ..           .|..::|:       .|:.|.::.:...|.|.:...|......|...|:||:
  Rat   573 SVLENLRLAVRSQLGFPSIRLPMTGRSRNIWNRIFNFARSRHSGSLALVSGDGDEVVPSQSSSRE 637

  Fly  1017 VE---VH---FIAQNMTTLDDPDTVN----FEGMFEFVKAPTSCKDGRRKFGPSGTIDMTF---G 1068
            .|   .|   |.|::    ||.||.|    ..|....|.||..     :|..|:..::.|.   |
  Rat   638 TERSHPHRSLFSAES----DDTDTENERRDTAGASGGVAAPLP-----QKVPPTTAVEATVGTGG 693

  Fly  1069 DVECRSRPWLIEPSNGNKFLYVRLKAIFLSKHNPTQTLNATYVQTDTWRCETKSRAVLTTSEGLT 1133
            :...:|...  ..::|.:...|...::..::|..|..|:                   ..::||.
  Rat   694 NSSAQSTRG--GHADGREVSSVEAPSVSPARHQLTSALS-------------------RMTQGLR 737

  Fly  1134 IVACPLSPDSNAYEFVEIFSSGWNERP----NFALVNRSRAISVEFLRP-GNGEYSFNWMELIPR 1193
            .|...|...|         |:..|..|    :..:..|.....||.|.| .:|....:..| ..|
  Rat   738 WVRFTLGRSS---------STNQNRSPLRQLDTGVSGREDDDDVEMLIPVSDGASDIDANE-CSR 792

  Fly  1194 PTLSMAED------------------------CQFKC-----AEL-GACVNASVWCDGVVHCPSG 1228
            |.|.:|.|                        |: :|     |:: ..|:.|:|..:.   |   
  Rat   793 PLLDLASDQVQGFRQPHSSGNPGARTSNRDGPCE-RCGIVHTAQIPDTCLEAAVKTEA---C--- 850

  Fly  1229 DDETFLQC 1236
            |||..|.|
  Rat   851 DDEALLLC 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32432NP_649266.1 LDLa 214..245 CDD:197566
CUB 503..646 CDD:238001 36/187 (19%)
LDLa 1203..1231 CDD:197566 7/33 (21%)
Lrp12NP_001128355.1 CUB 47..158 CDD:238001 26/138 (19%)
LDLa 166..200 CDD:238060 9/33 (27%)
LDLa 215..254 CDD:238060 3/39 (8%)
CUB 267..371 CDD:238001 28/149 (19%)
LDLa 375..410 CDD:238060 7/40 (18%)
LDLa 413..448 CDD:238060 8/49 (16%)
LDLa 451..485 CDD:238060 6/33 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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