Sequence 1: | NP_649266.1 | Gene: | CG32432 / 40310 | FlyBaseID: | FBgn0052432 | Length: | 1307 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001128355.1 | Gene: | Lrp12 / 314941 | RGDID: | 1304943 | Length: | 858 | Species: | Rattus norvegicus |
Alignment Length: | 983 | Identity: | 185/983 - (18%) |
---|---|---|---|
Similarity: | 302/983 - (30%) | Gaps: | 382/983 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 481 LGDLIPGTYCSRIFSDCDKKPCRLQ-------SPNFPGIYPRNLTCYYAVRQH------------ 526
Fly 527 DVPHGKHALILVKQPKGNLVWISTQET-------AAANKMAPPPSASDKDKKFEPRLKTWNYCDY 584
Fly 585 IQENVKPKWKSTDYVT------VYDGYTTRDPIIL--KF-CGGGQAVPAA----------VSSGP 630
Fly 631 ELLVEFSTSPFGTFTGTSSQVLPLYGFQ------------------------LEVEVQFVDIQSP 671
Fly 672 TYSKNKKPCEFWIRGAGRGILESPKHS--LAPNSTCLYHLQGLGVFKTFDHLSLSRRTSSQSGMH 734
Fly 735 QPLSRFKVWISVLKFNLDPEFGQIDETSVGAIGVLQTQEDCSGMLRIWDGTLRDAPVCKDLNCAT 799
Fly 800 ETSSYNTLG----------HYT---------HNSTSVIARFCRG------------TIPRTCD-- 831
Fly 832 ------RSNINETYARPCTISESYVSTSDAITLELRNTESTVLRPLDFKLKYEFIDLHQDGLPWG 890
Fly 891 GGEHDC------------NR-KFLSSMMDRKD---------------------PAIFRSV--RNI 919
Fly 920 FLFGRGGTRNLKCIYKFEAQRGER--VRIKMRKVTTTNRPCYSRV--------DEDI-----NRS 969
Fly 970 FC-----------YGDTNVRI-------EIFERPYHDSILLHRGCMCNSSNQSHLPVEYTSTSRD 1016
Fly 1017 VE---VH---FIAQNMTTLDDPDTVN----FEGMFEFVKAPTSCKDGRRKFGPSGTIDMTF---G 1068
Fly 1069 DVECRSRPWLIEPSNGNKFLYVRLKAIFLSKHNPTQTLNATYVQTDTWRCETKSRAVLTTSEGLT 1133
Fly 1134 IVACPLSPDSNAYEFVEIFSSGWNERP----NFALVNRSRAISVEFLRP-GNGEYSFNWMELIPR 1193
Fly 1194 PTLSMAED------------------------CQFKC-----AEL-GACVNASVWCDGVVHCPSG 1228
Fly 1229 DDETFLQC 1236 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG32432 | NP_649266.1 | LDLa | 214..245 | CDD:197566 | |
CUB | 503..646 | CDD:238001 | 36/187 (19%) | ||
LDLa | 1203..1231 | CDD:197566 | 7/33 (21%) | ||
Lrp12 | NP_001128355.1 | CUB | 47..158 | CDD:238001 | 26/138 (19%) |
LDLa | 166..200 | CDD:238060 | 9/33 (27%) | ||
LDLa | 215..254 | CDD:238060 | 3/39 (8%) | ||
CUB | 267..371 | CDD:238001 | 28/149 (19%) | ||
LDLa | 375..410 | CDD:238060 | 7/40 (18%) | ||
LDLa | 413..448 | CDD:238060 | 8/49 (16%) | ||
LDLa | 451..485 | CDD:238060 | 6/33 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |