DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32432 and LDLRAD3

DIOPT Version :9

Sequence 1:NP_649266.1 Gene:CG32432 / 40310 FlyBaseID:FBgn0052432 Length:1307 Species:Drosophila melanogaster
Sequence 2:NP_777562.1 Gene:LDLRAD3 / 143458 HGNCID:27046 Length:345 Species:Homo sapiens


Alignment Length:134 Identity:41/134 - (30%)
Similarity:52/134 - (38%) Gaps:47/134 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 LGP-----GKPVNLQLAPGSSSTG-CSL-AEFSCSNGRCVPLSKYCNNLNDCGDGSDE---PRFC 249
            |||     ......||.||::.|. |:: ..|.||||||:|.:..|:.|.||.|.|||   |:..
Human     4 LGPLCLLLSSAAESQLLPGNNFTNECNIPGNFMCSNGRCIPGAWQCDGLPDCFDKSDEKECPKAK 68

  Fly   250 TRCNRTYYGDIGQTYALELHRPKQDRVPFVCVLTFTAAGGQHGDVVQVTLDSFTIGRFTSYVHEG 314
            ::|..|:                           |..|.|.|          ..||||.....|.
Human    69 SKCGPTF---------------------------FPCASGIH----------CIIGRFRCNGFED 96

  Fly   315 CPDG 318
            ||||
Human    97 CPDG 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32432NP_649266.1 LDLa 214..245 CDD:197566 15/31 (48%)
CUB 503..646 CDD:238001
LDLa 1203..1231 CDD:197566
LDLRAD3NP_777562.1 LDLa 32..64 CDD:238060 16/31 (52%)
LDLa 71..106 CDD:238060 15/67 (22%)
LDLa 113..147 CDD:238060
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 270..345
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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