DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11456 and MEP-1

DIOPT Version :9

Sequence 1:NP_001262130.1 Gene:CG11456 / 40309 FlyBaseID:FBgn0037031 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001137875.1 Gene:MEP-1 / 38327 FlyBaseID:FBgn0035357 Length:1152 Species:Drosophila melanogaster


Alignment Length:547 Identity:104/547 - (19%)
Similarity:156/547 - (28%) Gaps:212/547 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 KEQTAAGSNSQDKQTVVER-SENSEPPASELQPMPFKDFRLVLRANMLEPCSFGKECPFKFQDAT 115
            |.:.|...||::.:..:.. |.|.:  ||:.:..||| ||       ::.|.|   |.||.:.|.
  Fly   643 KMRKAQVQNSKEFEMAINALSGNLQ--ASKTKNAPFK-FR-------MKRCEF---CNFKSESAM 694

  Fly   116 KMELHCSC-HKGG-SFSCCECGMELPNWRRCSAHLWKAHQVDVDLL------VCPVFECNYKSPI 172
            .|..|... |..| .:.|..|..|:.|......|:...|.:...|:      .||  .|.::...
  Fly   695 AMANHYETPHMNGVLYKCNFCTFEIRNATEIVYHMEAVHNIKARLIKPLPYHQCP--NCGFEDNG 757

  Fly   173 SALVWRHMQV-HKKWRP-----------------------------------------------R 189
            .|.:.||..| .||:||                                               .
  Fly   758 KAKLARHQPVCAKKFRPELNLAPPNDWEAPAKIPRIKPRHGLVGTATAYQAMAAQAAAQKAALAN 822

  Fly   190 VLRSLAAVQRRRKLKEQSAEMAAQPAA-------LPPS--------------------SKKNKY- 226
            :.:..||.|.|..|  |:|.:|||.||       .||.                    |..|.| 
  Fly   823 IQQQQAAAQARNNL--QAAALAAQNAAKMRQRAPQPPKQNIVRNPAPVRGGNAMNAGLSLPNSYQ 885

  Fly   227 -------YAEK-----------------------------------------------------T 231
                   .|.|                                                     .
  Fly   886 LAAGQLVQASKKPMAGQPSISITPLPRQSSVGAGAGASSSKAPQAAAGMKPGQSPSGNNKAQFVI 950

  Fly   232 CEICNRKFVNGKTLSKHVKTVHNKIKPFICNVCGKKTARKASLIIHMRQHTGEKPLQCGECKFST 296
            ||||:....:.:.|..|::.:| |:|                  ||.:......||.|.:|:|..
  Fly   951 CEICDGYIKDLEQLRNHMQWMH-KVK------------------IHPKMIYNRPPLNCQKCQFRF 996

  Fly   297 RDPSVLHKH----------RQRHDSQDTRSSLKCSQCD--YFCIQANALKR--HMRLNHAE-AYR 346
            .....|.:|          ..:..:...:.:.:|..|.  |.....|.:.|  ||.|..|. :|:
  Fly   997 FTDQGLERHLLGSHGLVTSSMQEAANKGKDAGRCPVCGRMYQWKLLNHVSRDHHMTLKPAHLSYK 1061

  Fly   347 DLCCDICSFTSINVERLRAHKQDHRQGLITNCEDSMDARAAGFKYPRKVGDKNGEISA---DCFM 408
               |.:|:.|....::...|.......:.....||....|.........|.....:.|   ....
  Fly  1062 ---CTVCTATFGMYKQFETHVYTAHSTVARKAMDSKKNSAQSSGSGSGAGMSRSSLGAANDSLLK 1123

  Fly   409 PLESVDSLPHEPALDTGGVTIPAPPSE 435
            ||:..|.:          ..||.|.|:
  Fly  1124 PLKINDEI----------TIIPQPASK 1140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11456NP_001262130.1 C2H2 Zn finger 232..253 CDD:275368 6/20 (30%)
C2H2 Zn finger 261..281 CDD:275368 2/19 (11%)
C2H2 Zn finger 289..309 CDD:275368 5/29 (17%)
MEP-1NP_001137875.1 BSP_II <121..>226 CDD:283165
C2H2 Zn finger 951..977 CDD:275371 9/44 (20%)
C2H2 Zn finger 989..1010 CDD:275371 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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