DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11456 and Zfp316

DIOPT Version :9

Sequence 1:NP_001262130.1 Gene:CG11456 / 40309 FlyBaseID:FBgn0037031 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_001100591.1 Gene:Zfp316 / 304293 RGDID:1311647 Length:1016 Species:Rattus norvegicus


Alignment Length:226 Identity:65/226 - (28%)
Similarity:95/226 - (42%) Gaps:48/226 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 EKTCEICNRKFVNGKTLSKHVKTVHNKIKPFICNVCGKKTARKASLIIHMRQHTGEKPLQCGEC- 292
            |.||::|.:.|.:...|:|| :..|..:|||.|..|||....::.|.||.|.||||||..|.:| 
  Rat   336 ETTCDVCGKVFPHRSRLAKH-QRYHAAVKPFGCEECGKGFVYRSHLAIHQRTHTGEKPFPCPDCG 399

  Fly   293 -KFSTRDPSVLHK--------------------------HRQRHDSQDTRSSLKCSQCDYFCIQA 330
             :|..:...|.|:                          |::.|..:   ....|..|.....|:
  Rat   400 KRFVYKSHLVTHRRIHTGERPYRCVFCGAGFGRRSYLVTHQRTHTGE---RPYPCLHCGRSFSQS 461

  Fly   331 NALKRHMRLNHAEAYRDLCCDICSFTSINVERLRAHKQDHRQGLITNCEDSMDARAAGFKYPRKV 395
            :||.||..::.|:  |..||..|.    ...||||..|.||:|  ..|.:......| ...|.:|
  Rat   462 SALARHQAVHTAD--RPHCCPDCG----QAFRLRADFQRHRRG--GGCTEPSSGDGA-LTAPHEV 517

  Fly   396 GDKNGEISADCFMPLESVDSL-PHEPALDTG 425
            |....|:.    |.:.:|.:. |.|  |::|
  Rat   518 GMAPNEVE----MAIAAVATAEPEE--LESG 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11456NP_001262130.1 C2H2 Zn finger 232..253 CDD:275368 6/20 (30%)
C2H2 Zn finger 261..281 CDD:275368 8/19 (42%)
C2H2 Zn finger 289..309 CDD:275368 6/47 (13%)
Zfp316NP_001100591.1 KRAB 151..211 CDD:214630
KRAB 151..190 CDD:279668
COG5048 <335..495 CDD:227381 50/168 (30%)
C2H2 Zn finger 339..359 CDD:275368 6/20 (30%)
C2H2 Zn finger 367..387 CDD:275368 8/19 (42%)
zf-C2H2 367..387 CDD:278523 8/19 (42%)
zf-H2C2_2 379..404 CDD:290200 13/24 (54%)
C2H2 Zn finger 395..415 CDD:275368 5/19 (26%)
zf-H2C2_2 407..432 CDD:290200 2/24 (8%)
C2H2 Zn finger 423..443 CDD:275368 1/19 (5%)
zf-H2C2_2 435..460 CDD:290200 4/27 (15%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
zf-H2C2_2 463..486 CDD:290200 9/28 (32%)
C2H2 Zn finger 479..497 CDD:275368 8/21 (38%)
C2H2 Zn finger 707..727 CDD:275368
zf-H2C2_2 719..744 CDD:290200
C2H2 Zn finger 735..755 CDD:275368
zf-H2C2_2 747..772 CDD:290200
COG5048 <760..947 CDD:227381
C2H2 Zn finger 763..783 CDD:275368
zf-H2C2_2 775..800 CDD:290200
C2H2 Zn finger 791..811 CDD:275368
C2H2 Zn finger 819..839 CDD:275368
zf-C2H2 845..867 CDD:278523
C2H2 Zn finger 847..867 CDD:275368
zf-H2C2_2 859..884 CDD:290200
C2H2 Zn finger 875..895 CDD:275368
zf-H2C2_2 887..912 CDD:290200
C2H2 Zn finger 903..923 CDD:275368
zf-H2C2_2 916..940 CDD:290200
C2H2 Zn finger 931..951 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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